Pseudomonas syringae pv. syringae B728a: Psyr_4300
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Entry
Psyr_4300 CDS
T00246
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03030
DNA replication
psb03430
Mismatch repair
psb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyr_4300
03430 Mismatch repair
Psyr_4300
03440 Homologous recombination
Psyr_4300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psb03032
]
Psyr_4300
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_4300
Enzymes [BR:
psb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyr_4300
DNA replication proteins [BR:
psb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psyr_4300
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psyr_4300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
AAY39330
UniProt:
Q4ZNE2
LinkDB
All DBs
Position
complement(5126781..5127395)
Genome browser
AA seq
204 aa
AA seq
DB search
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLL
ARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAANLTAHLTNELRQTHGISAISH
QMLCSLQKVPAAKISETLKRQRGV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgttggaacgtattgcagtcatcgactttgaaaccaccggcatctccccgggccatagc
tgccgggcgaccgagattgcggtggtgatcatggagcaggggcgtatcgtcgagcgcttt
cagagcctgatgaatgccggcgtgcgtattcctgcgttcatcgaagggttgaccggcatc
agtaacaacatgattcgtaccgcccccagcgccgagcgggtgatgggcgatgtggcggat
ttcgtcggttcgacaccgctggtggcgcacaacgcctcgttcgaccagaagttctgggac
tacgagctgtcgcgtatccagcgcacgcgcgaacagagcttcgcctgttcactgctgctg
gcccgacgcctgatgcccggcgcaccgaaccacaagctcggcacgttgacccgctatgcg
cgtctgcccgacaccggcaaggctcaccgggcgatggccgatgcggaaatggcggccaac
ctgaccgcgcacctgaccaacgaattgcgccagacccacggcatctctgccatctcccac
cagatgctgtgttccctgcagaaagtcccggccgcgaagatcagtgaaaccctgaagcgc
cagcgcggcgtctga
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