Pseudomonas syringae pv. syringae B728a: Psyr_4345
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Entry
Psyr_4345 CDS
T00246
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psb03016
]
Psyr_4345
Enzymes [BR:
psb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Psyr_4345
Transfer RNA biogenesis [BR:
psb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Psyr_4345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAY39375
UniProt:
Q4ZN97
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All DBs
Position
5198298..5199626
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARV
TRLPQVDVSFPEIEKFDHLPEPRVDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEVIHLAENGVREVTLLGQNVNGYRGTTHDGRVADLADLIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGI
SISSDFIVGFPGETEKDFDNTMKLIEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKE
RLAALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPKLI
GQFADVHIDDAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagctttatatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgacctgctgggcgaacatcaggccctggaagtcaccgctcgcgcggaagac
gccgacgtgatcctgctcaatacctgctcgattcgtgagcgcgcccaggaccgggtgtat
tcccagctcggccgctggcgcgagctgaagctggccaatccggaaatggtcatcgccgtc
ggtggctgcgtggccagccaggaaggcgcagccattcgcgatcgcgcaccctatgtggac
gtggtgttcggcccgcagaccctgcaccgcctgccggaaatgatcgacgccgcacgcgtg
acccgcttgccgcaggtcgacgtctcgttcccggaaatcgaaaagttcgaccatttgccc
gagccacgcgtcgatggcccgagtgcttatgtgtcggtgatggaaggctgcagcaaatac
tgcaccttctgcgtggtgccctacacccgtggcgaggaagtcagtcgtccgttcgacgac
gtgctgagtgaagtcatccacctggccgaaaacggcgtgcgtgaagtcactctgctgggg
cagaacgtcaacggttatcgcggcaccacccacgacggccgcgttgcagacctggcggac
ctgatccgcgtagtcgccgccgtcgatggcatcgaccgcattcgctacaccacctcgcac
ccgctggaattttccgacagcctgatccaggcccacgcggaagtgccggagctggtcaaa
cacctgcatttgcctgtgcaatcgggttccgaccgcatcctggcggcgatgaagcgcaac
cacaccacgctggaatacaagtcccgcttgcgcaagctcagggccgcagtgccgggcatc
agtatcagttccgacttcatcgtcggcttccccggcgagaccgaaaaggatttcgacaac
accatgaagttgatcgaggacgtgggtttcgacttctcgttctcgttcgtctacagcccg
cgtccgggcacgcccgccgcggacctcaaggacgacacgccggaagccctgaaaaaagag
cgactggccgcgctgcaacatcgtctgaaccagcagggtttcgagatcagccgacagatg
gtcggcagcatccagcgcattctggtaaccgactactcgaagaaagacccgggagaactg
cagggccgcaccgagaacaaccggattgtcaattttcgctgcgacaaccccaaattgatc
gggcagtttgccgatgtacacatcgatgatgcacagcctcactcgttgcgcggctcgctg
ctacagtaa
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