Pseudomonas syringae pv. syringae B728a: Psyr_4524
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Entry
Psyr_4524 CDS
T00246
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Psyr_4524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psb03021
]
Psyr_4524
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_4524
Enzymes [BR:
psb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Psyr_4524
Transcription machinery [BR:
psb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Psyr_4524
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Psyr_4524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AAY39554
UniProt:
Q4ZMR8
LinkDB
All DBs
Position
complement(5390214..5391215)
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AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGVLNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgccacattgatgtgcaggttgtcagt
ccaacccgcgccaaaatcactctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgcttcgccgcattttgttgtcctccatgcccggctgtgcagtagtcgaggccgag
attgacggtgtactccatgagtacagcgccatcgaaggtgtacaggaagacgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgagacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaaccccgatcacgtaatcgctaacctggcgtctaacggcgtcttgaac
atgaagctcaccgtagctcgtggtcgtggttatgagccggcagactcgcgtcaaagcgat
gaagacgaaagccgcagcattggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgaacagcgtactaacctggacaagctg
gttattgatctggaaaccaacggtactctggaccctgaagaggctatccgtcgcgctgca
accattctgcaacagcagttggctgcgttcgtcgacctcaaaggcgacagcgaaccagtg
gtaatcgaacaggaagacgagatcgatccgatcctgcttcgtccggttgacgatttggaa
ctgaccgtgcgttcggccaactgccttaaggcggagaacatctactacatcggcgatctg
attcagcgcaccgaagtagagctgttgaagactccgaacctgggcaagaaatccttgacc
gagatcaaggacgttctggcttctcgtggtctctccctcggcatgcgcctcgacaactgg
ccgccggcaagtcttaagaaggacgacaaggctacggcctga
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