Pseudomonas syringae pv. syringae B728a: Psyr_4712
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Entry
Psyr_4712 CDS
T00246
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00260
Glycine, serine and threonine metabolism
psb00460
Cyanoamino acid metabolism
psb00630
Glyoxylate and dicarboxylate metabolism
psb00670
One carbon pool by folate
psb00680
Methane metabolism
psb01100
Metabolic pathways
psb01110
Biosynthesis of secondary metabolites
psb01120
Microbial metabolism in diverse environments
psb01200
Carbon metabolism
psb01230
Biosynthesis of amino acids
psb01240
Biosynthesis of cofactors
psb04981
Folate transport and metabolism
Module
psb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Psyr_4712
09102 Energy metabolism
00680 Methane metabolism
Psyr_4712
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Psyr_4712
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Psyr_4712
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Psyr_4712
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Psyr_4712
Enzymes [BR:
psb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Psyr_4712
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AAY39739
UniProt:
Q4ZM83
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All DBs
Position
5583431..5584684
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLSAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIERARQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTATGLIDYDEVERIAVECQPKMIIAGFSAYSK
TLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARANEELEKKFNSAVFPGGQGGPLMHVIAAKAVCFKEAMEPGFKAYQQQVIDNAQAMAQ
VFIDRGFDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNSVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDNLGDADVEADVASQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttatgacgatgcactgttgtcggcgatgaac
gccgaggagcagcgtcaggaagaccatatcgagctgatcgcctcggagaactacaccagc
aaacgcgtgatgcaggcgcagggcagcggcctgaccaacaagtacgcagagggctatccc
ggcaagcgttactacggcggttgcgagcacgtcgacaaggtcgagcaactggccatcgaa
cgcgccagacagctgtttggtgccgactatgccaacgttcagccgcattccggaagtcag
gccaacgcagcggtctatctggcgctgcttcaggccggcgataccgtgttgggcatgagc
ctggcgcacggcggtcatctgactcacggtgccaaggtcagcttctcgggcaaactctat
aacgccgttcagtacggcatcgacaccgcgaccgggctgatcgattacgacgaagtcgag
cgcattgccgtcgaatgccagccgaaaatgatcatcgccgggttttcagcctactccaag
accctcgacttcccgcgcttccgcgcaatcgccgacaaggtgggcgcctacctgttcgtc
gacatggcgcacgtcgccggtctggttgcagccggtctttacccgaatccgctgccctac
gcagacgtagtcaccaccacgacccacaagaccctgcgcggcccacgcggcggcctgatt
ctggccagggccaacgaagagctggaaaagaaattcaattccgccgtcttccccggtggt
cagggcggcccgctgatgcacgtgatcgccgccaaggccgtgtgtttcaaggaagccatg
gagcccggcttcaaggcctatcaacagcaggtcatcgacaacgcgcaagcgatggcgcag
gtgttcatcgaccgaggcttcgacgtggtctccggcggcaccgacaaccatctgtttctg
gtcagcctgatccgtcagggcctgaccggcaaggacgccgacgccgcgctggggcgtgcg
cacatcaccgtcaacaagaactcggtgcccaacgacccgcagtcgccgttcgtgacgtcc
ggcctgcgcatcggcacaccggccgttaccacccgcggcttcaaggtgacccagtgcgtc
gagctggccggctggatctgcgacatcctcgacaacctcggtgatgccgatgtcgaggcc
gacgtcgccagccaggtcgccgccctgtgcgccgattttccggtttatcgctga
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