Pseudomonas syringae pv. syringae B728a: Psyr_4715
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Entry
Psyr_4715 CDS
T00246
Name
(GenBank) Sarcosine oxidase, alpha subunit, heterotetrameric
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00260
Glycine, serine and threonine metabolism
psb01100
Metabolic pathways
Module
psb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Psyr_4715
Enzymes [BR:
psb01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Psyr_4715
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Psyr_4715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
NAD_binding_8
GIDA
Pyr_redox_3
DAO
FAD_binding_3
Thi4
AlaDh_PNT_C
Lycopene_cycl
DDR1-2_DS-like
Motif
Other DBs
NCBI-ProteinID:
AAY39742
UniProt:
Q4ZM80
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All DBs
Position
5586261..5589281
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AA seq
1006 aa
AA seq
DB search
MSQTHRLPNGGRINRSKVLNFTFNGQTYQGFEGDSLASALLANGVDIIGRSFKYSRPRGI
FAAGSEEPNAVLQIGATEATQIPNVRATQQALYSGLVATSTNGWPSVNTDVMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDSYDAMNQHCDVLIVGAGP
AGLAAALAAGRSGARVIIADEQEEFGGSLLDSRESLDGKPATEWVSTVVAELKSLHNVTL
LPRSTVNGYHDHNFLTIHERLTDHLGDRAPIGMVRQRMHRVRAKRVVLAAGTHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLHVVAIADARHN
PRGPLVEEARAKGIRILTGSAVIEARGSKRVTAARVAAIDVKTHSVTSPGEWLECDVVAS
SGGYSPIVHLASHLGGKPVWREDILGFVPGEAPQKRICVGGVNGVYSLADSLADGFEGGV
RAASEAGFKVVEGVMPKALSRAEEPTLALFQVPHEKGTARAPKQFVDFQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPEMGTTMFRPNYTPVTF
GAIAGRHCKHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLPAAVARECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKL
LSEVTDIDLGRDAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREQRKQLVGLKPVDPAKWLPEGAQLVFDTKQTIPMSMVGHVTSSYAHNSLGYSF
AMGVVKGGLARMGERVFAPLADGSVIEAEIVSSVFFDPKGERQNIE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacccatcgcctgcccaacggcggccgtatcaatcgcagcaaggtgctcaac
tttaccttcaacggccagacctaccagggctttgaaggtgactcgctggcctctgccctg
ctcgccaacggtgtcgatatcatcggccgcagcttcaaatactcccgcccgcgcggcatc
ttcgcagcgggttcggaagagcccaatgcggtgctgcagatcggcgcgaccgaagcgacg
cagatccccaacgtgcgcgctacgcaacaggcgctgtactcgggactggtcgcaaccagc
accaacggctggccaagcgtgaacaccgacgtgatgggcattctgggcaaggtcggcggc
aagctgatgccgccgggtttctactacaaaaccttcatgtacccgcaatcgttctggatg
acttacgagaagtacatccgcaaggctgccggcctggggcgctcgccgaccgagaacgac
ccggacagctacgatgcgatgaaccagcactgcgacgtgttgatcgtcggtgcgggcccg
gccggtctggccgctgccttggcagcaggtcgcagcggtgcccgagtgatcattgccgat
gaacaggaagagttcggcggcagcctgctcgacagccgcgaaagcctcgacggcaaaccc
gccactgaatgggtgtcgacggtcgtcgccgagctgaaaagcctgcacaacgtcaccctg
ctgccgcgttccacggtcaatggttaccacgatcataatttcctgaccatccacgagcgc
ctgaccgaccacctgggcgatcgcgcgccgatcggcatggtccgccagcgcatgcaccgg
gtacgcgccaaacgcgtagtgctggccgccggtactcacgagcgtccgctggtctatggc
aacaacgatgtgcccggcaacatgctggccggtgccgtatcgacttacgtccgtcgttat
ggcgtggcaccaggcaagaaactggtgctttccaccaacaacgatcacgcctatcgcgtc
gctctggactggctcgacgccagtctgcacgtggtcgcgattgccgatgcacggcataac
ccacgtggtccgctggttgaagaagcgcgggccaaaggcattcgcatcctgaccggcagc
gcggtcatcgaggcccgcggcagcaagcgcgtgacggctgcccgcgttgccgccatcgac
gtcaagacgcacagcgtgaccagccccggcgaatggcttgaatgcgacgtggttgccagc
tccggcggttacagcccgatcgtgcacctggcctcgcacctgggcggcaagccggtctgg
cgcgaggacatcctcggcttcgtaccaggcgaggcaccacagaaacgtatctgcgtaggc
ggcgtcaacggcgtctacagcctggctgacagtcttgccgatggcttcgaaggcggcgtg
cgcgctgccagtgaagcgggcttcaaggtggtcgaaggcgtgatgcccaaagccctcagc
cgtgctgaagagccgacgctggcgctgtttcaggtgccgcatgaaaaaggcaccgctcgg
gcacccaagcagttcgttgactttcagaacgacgtcaccgccgccgccattgaactggca
acgcgcgagggtttcgagtcggtcgagcacgtcaagcgctacaccgctctgggtttcggc
accgatcagggcaagctgggcaacgtcaacggcctggccatcgccgcccgttcactgaat
gtgtcgatcccggaaatgggcaccaccatgttccgtcccaactacacgccggtgaccttc
ggcgcgatagccggacgtcattgcaaacacatcttcgaacccgtgcggttcaccgcgctg
catgcctggcatgtcaaaaacggtgctgaattcgaggacgtcggccagtggaaacggccg
tggtacttcccgaaaaacggcgaagacctgcccgccgccgttgctcgcgaatgcaaggcg
gtgcgcgacagcgtcggcctgctggacgcatcgacgctgggcaagatcgatattcaaggc
ccggatgcacgcgagtttctcaaccgcatctacaccaacgcctggaccaaactggacgtg
ggcaaggcccgctatggcctgatgtgcaaggaagacggcatggtcttcgatgacggggtc
actgcctgtctcgctgacaaccacttcctgatgaccaccaccacaggcggcgcagcgcgt
gtcctgcaatggctggaaatctatcaacagaccgaatggccggacctgaaagtgtatttc
acctcagtgaccgatcactgggcgaccctgacgctgtccggccccaacagccgcaagctg
ctcagcgaagtcaccgatatcgatctgggccgtgacgcctttccgttcatgacctggaag
gaaggtctggtcgccggagtgccggcccgggtattccgcatctcgtttaccggcgagctg
tcctacgaggtcaacattcaggccgactacgcgatgggcgttctggaaaagatcgccgag
gcaggcaaacagtacaacctgacgccttacggcaccgagaccatgcacgtgctgcgcgca
gagaagggtttcatcatcgtcggtcaggacactgacggctcgatgacgcccgacgacctg
aacatgggctggtgtgtcggccgtaccaagccgttctcctggatcggctggcgcggcatg
aatcgcgaagactgcgtgcgtgaacagcgcaagcaactggtcggcctcaagccggtggac
cctgccaaatggctgccggaaggcgcgcaactggtcttcgacaccaaacagacgattccg
atgagcatggtcggccacgtgacctccagttacgcgcacaactcgctgggctattcgttc
gcgatgggcgtggtcaaaggcggcctggcgcgtatgggcgagcgggtcttcgcacccttg
gccgatggcagcgtgatcgaagccgagatcgtttcttcggtgttcttcgatccgaagggc
gagcggcagaacatcgagtag
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