Pseudomonas syringae pv. syringae B728a: Psyr_4954
Help
Entry
Psyr_4954 CDS
T00246
Name
(GenBank) Protein of unknown function DUF877
KO
K11900
type VI secretion system protein ImpC
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Psyr_4954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psb02044
]
Psyr_4954
Secretion system [BR:
psb02044
]
Type VI secretion system
Imp/Vas secretion system core components
Psyr_4954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
Motif
Other DBs
NCBI-ProteinID:
AAY39981
UniProt:
Q4ZLJ1
LinkDB
All DBs
Position
5871865..5873367
Genome browser
AA seq
500 aa
AA seq
DB search
MTDKQPVTQQDSALVEVENFAPQSSLLDSIISESRVARSETERTRTRDLIGELVAQVLEG
EMTPSKDLIAVLDARIAEIDSMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLK
IHLLNASKKDLVRDLKASSEFDQSALFKKIYEEEYGTFGGAPFGMLLGDYEFNRSPEDMY
LLEEISHVAAAAHAPFISAASAELFGWDSFTDMAGPRDLAKIFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFSRY
GWCVAIRGVEGGGLVEGLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSTQKQKQYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RKDVELFLNKWLSSYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQSTRG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagcaacccgtgactcagcaggacagcgctctggttgaagtggaaaacttc
gccccgcaatcttccttgctcgacagcatcatttccgaaagccgcgttgcacgctccgaa
accgagcgcacccgtacccgcgatctgatcggcgaactggtggcccaggtacttgaaggc
gagatgacgccgagcaaggacctgattgccgtgctcgacgcgcgcatcgccgagatcgat
tcgatgctctccgagcaaatgaacgaaatcatgcacgcccgtgaattccagcagctggaa
gcatcctggcgcggcctgaagtatcaggttgaccagaccgagaccagcaccacgctgaag
atccacctgctcaacgcgtcgaaaaaagacctcgtgcgtgacctcaaggcatcgtccgaa
ttcgaccagagcgcactgttcaagaagatctacgaagaagagtacggcaccttcggtggt
gcgccgttcggcatgctgctgggtgactacgagttcaaccgcagcccggaagacatgtac
ctgctggaagagatctcccacgtggcagctgccgcccacgcgccgttcatttcggctgca
tcggctgaactgttcggctgggactcgttcaccgacatggccggccctcgcgacctggcg
aagatcttcgacaccgtcgaatacgccaagtggaagtcgttccgcgcctccgaagactcc
cgctatgtcggcctgaccctgccgcacgtgctgggtcgcctgccgtatggcccggatacc
acgcctgtcgaagaattcaacttcgtcgaaagcgtcgatggccgtgaccacaacaaatac
ctgtggatgaacgctgcctacgcgctgggcactcgtgtgaccgacgcattctcccgctac
ggctggtgcgtggcgatccgtggtgtggaaggcggtggtctggtcgaaggcctgccgact
cataccttcaagaccgatgacggtgaaatcgcgctcaaatgcccgactgaaatcgccatc
accgaccgtcgcgaaaaagagctctcggacctcggcttcattccgctggtgcactgcaaa
ggtaccgactacgccgcgttcttcggcacccagtcgacccagaagcagaagcagtacaac
accgacattgccaacgccaacgcacgtctgtcggcgcagctgcaatacatcttcgcgacc
tcgcgtatcgctcactacatgaaagcgatcatgcgcgacaagatcggcagttttgcatcg
cgcaaggatgtcgagctgttcctcaacaagtggctgtccagctacgtgttgctggatgac
accgccagccaggaagccaaggccaagttcccgctgcgcgaggcgcgtgccgaagtgttc
gaagtccctggcaagcctggcgtctacaaggccgtgacttacctgcgtccgcattaccaa
ctggatgaactgacggcatcgctgcgtctggtcgccgaattgccgcaatcgacacgcggc
taa
DBGET
integrated database retrieval system
