KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_4962
Entry
Psyr_4962         CDS       T00246                                 
Name
(GenBank) ImcF-related:Protein of unknown function DUF1215
  KO
K11891  type VI secretion system protein ImpL
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb02025  Biofilm formation - Pseudomonas aeruginosa
psb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Psyr_4962
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Psyr_4962
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psb02044]
    Psyr_4962
Secretion system [BR:psb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Psyr_4962
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: AAY39989
UniProt: Q4ZLI3
LinkDB
Position
5882205..5886137
AA seq 1310 aa
MKTLLRLLKSFWFLVPILWLISLAVCWFFAPRISWLQGYTLEAMAIISAFYLLLIVLRQY
RRIRTEHNLENLVQIEVDRSLKSTGEFRDQQVLRDRLKHAIAMLRTDRSAGGGGSSALYD
LPWYLVIGMSAAGKTSLLTRSGLSASIASSANDTESGTQHCDWYFSPEAVMIDTAGRYLR
DDQSASEFAAFLRMLKKQRSKAAVNGLVLVVSLPELLAASSAERNEMGARLVTRIEEYTD
CLDANPPIYLMLTKTDQLPGFNQAFDGMDLNERQQPLGMTFGLNEINTESLRTVLDRKLA
NLQAHVSRHVDAQIIALGADANSALLNFPNYFAELSAILEQFLQHFARSNVNGTQLLLRG
LYFTSALQTDKQLTPVYEDELSESFVLRPAKPYGAVEEEEEEEEHRKISDRSYFITDTFR
RVIFPDRDLTLYQSRHGRDRSIGPIVIAAALFAGLAFIGWQALSFQKNREWLANISQQLR
ELEQSPDRAQRLASGQGLELLRNQLATIEKYRTKGVPLQLSGGLYRGDDIYFATQTAYLQ
QLRTQALEPITLKLQLQMREFNEFAKTMDPQYGFGAAPAGSDSKTGKARAQGRKLLDRGA
RNVAAGRPTSLSSIPRSTGDVTNRLTGAARNTASQTRSEAIAALRNPATANDAAELSATT
GGLSLSEEMLGRLDERQVASIIESYNALKLYLILTQPTTHPETEFVNAALPVAWADISSE
ANPISDDVIEDNSPVYVQLLKNGDAPAMPRNEQLIDETRKSLKFFMISSSLVDREYLRLQ
LESSRQFPAIGLNDLVPMPGRQLLYGSEAVPAIFTRQGWEEFVKPELIKLVSGNLRNESD
WVLDGEGGDSVVQKANFVREFMSRYKRDYTKVWYTMIDSVGVRRFSDMANATQQLSLLSD
VRNSPVKLLLASVNDNTQWDVPAVREAQQTGVKRDDGFWGKVTGIFDNKEAAASVLVSPL
PAVDDGSLAKRFEPVSRVFATQNAEGADSTIMDRYLAALRKLKVRMNNIQRSQDVGKSSK
QLISETLEGQPSEVTNVRNYVETTVDTSQGGLSTSLQSLFSLPIQFAWETLRDPAGEQIA
KAWAKQVAKPWEQVMAHRYPIAADSRNEASVKDLQRFVDPESGLLPNFKRNEIGNLSDGE
GLGMGSGAKAAPLVNPKMVSNIDKASSLGEVIASLSDRDNGFEIMLEPSAYFTDIIFTLD
GQEQHYRNGKTSWSRFSWPGTTTAPGARLDVVTLSGERITVFDYTGRWGLLRMNDSARVA
DLDGIQQRFSWNTAKGPVSLVVRNYGGVKLTDLANVKALSALNATDGRTK
NT seq 3933 nt   +upstreamnt  +downstreamnt
atgaagacattactgcgcctgttaaaaagtttctggttcctggtcccgatactgtggctg
atcagcctggctgtctgctggtttttcgccccaaggatcagttggctgcaaggctacacg
ctcgaagcgatggcgatcatcagcgccttttacctgctgctgatcgtactgcgccaatac
cgccggattcgcaccgaacacaacctcgagaatctggttcagatcgaagttgaccgctcg
ctgaagtccactggcgagttccgtgatcagcaagtgctgcgcgaccgcctcaagcatgcc
attgccatgctgcgcaccgatcgttcggcaggcggcggcggctcctcggcgctctacgat
ctgccctggtatctggtcatcggcatgtccgcagcgggcaagacctcgctgctgacccgc
tccggcctgtcggccagcattgccagcagcgccaatgacacggaaagcggcacccagcac
tgcgactggtacttcagccctgaagccgtgatgatcgacaccgctggccgctaccttcgc
gatgatcagtccgccagcgaattcgcggcgttcctgcgcatgctcaaaaagcagcgcagc
aaggccgccgtcaatggtctggtgctggtggtcagcctgccggaactgttggccgcttct
tccgccgaacgtaacgaaatgggtgcgcgcctggtcacgcgcatcgaggaatacaccgat
tgcctggacgccaatccaccgatctacctgatgctgaccaagactgaccaactgcccggc
ttcaaccaggccttcgacggcatggacctgaacgagcgccagcagccgctgggcatgacg
ttcgggctgaacgagatcaacaccgaaagcctgcgcacggtgctcgatcgcaagctggcg
aacctgcaggcgcatgtcagtcgccatgtcgatgcacagatcatcgcgctgggtgccgat
gccaacagcgccctgctgaacttccccaactactttgccgagctgtcggcgatactcgag
cagttcctgcagcatttcgcgcgcagtaacgtcaacggtactcagttgttgctgcgcggc
ctgtatttcaccagcgccctgcaaaccgacaagcaactgacaccggtgtatgaagacgag
ctttcagagtcgttcgtcctgcgtccggcgaagccatacggtgcagtggaggaagaggaa
gaggaggaagaacaccggaaaatcagtgatcgcagttacttcatcaccgacaccttccgc
cgcgtcattttccctgaccgtgacctgaccctgtaccagtcacggcatggccgcgaccgc
tctattggcccgatcgtcatcgctgcggcgctgttcgccgggctggccttcatcggctgg
caagccctgtcgttccagaaaaaccgcgagtggctggccaacatcagccagcagttgcgc
gaactggagcagtccccggaccgggcacaacgccttgcctcgggccaaggcctggagctg
ctgcgcaatcagctggcaaccatcgagaaataccgcaccaagggcgtaccgctgcaactc
agcggcggcctgtaccgtggcgacgatatctacttcgccacccagaccgcctacctgcag
caactgcgtacccaggcgcttgagccgatcacgctgaaactgcaattgcagatgcgtgaa
ttcaacgagttcgccaaaaccatggacccgcagtatggcttcggggccgctcccgccggt
tccgacagcaaaaccggcaaggcgcgtgcgcaaggccggaaactgctggaccgtggcgct
cgcaacgtcgcggcaggccgtccgaccagcctgagcagcattccgcgcagcaccggcgac
gtgaccaatcgcctgaccggcgccgcgagaaacacggccagccagacacgcagcgaggcc
atcgccgcactgcgtaacccggccaccgcaaacgatgcggccgagttgtcggccaccacg
ggcggtctgtcgctgtcggaagagatgctcggacgactcgatgaacggcaggtggcatcc
atcatcgagtcatacaacgctctcaagctttatctgattctgactcagccgaccacgcac
ccggaaaccgagttcgtcaacgcggcgttgccggtggcctgggcggatatttccagcgag
gccaatccgatcagcgacgacgtcatcgaggacaactcgccggtctatgtacagttgctc
aagaacggcgacgcgccggccatgccgcgcaatgagcagttgatcgacgagacccgcaag
agcctgaagtttttcatgatctccagctcgctggtggaccgtgaatacctgcgcctgcaa
ctggaatccagccgtcagttccccgctatcggcctgaatgatctggtgccgatgccgggt
cgtcagttgctgtacggttcggaagccgtgcctgcgattttcacccgtcagggctgggaa
gagttcgtgaagcccgagctgatcaagctggtgtccggcaatctgcgcaacgaatcggac
tgggtgctcgacggtgaaggcggcgacagcgtggtgcagaaagccaacttcgtccgtgag
ttcatgtcccgttacaagcgtgactacacgaaagtctggtacaccatgatcgacagcgtg
ggcgtacgtcgcttcagcgacatggccaacgccacgcagcagttgtcattgctcagtgac
gtgcgcaattcgccggtcaagctgctgttggcctcagtcaacgacaacacgcaatgggac
gtccctgcagttcgcgaggcgcaacagaccggggtcaagcgcgacgatggcttctggggc
aaggtcaccggcatcttcgacaacaaggaagcggctgccagcgtactggtctcgccgctg
cctgcagtggatgacggcagtctggccaagcgcttcgagcctgtatcgcgggttttcgcc
acacagaacgccgaaggcgccgacagcaccatcatggatcgctacctggcagcgctgcgt
aagctcaaagtgcggatgaacaacatccagcgctcgcaggatgtcggcaagagcagcaag
cagttgatcagcgaaaccctcgaagggcagccgagcgaagtcaccaacgtgcgtaactac
gttgaaaccacggtcgataccagtcagggcgggctttccacttcgctgcaaagcctgttc
agcctgccgattcagttcgcctgggaaacgctgcgtgatccggctggcgaacagatcgcc
aaagcctgggccaaacaggtcgccaagccctgggaacaggtcatggctcaccggtacccg
attgctgcggacagccgcaacgaggcctcggtgaaagacctgcagcgtttcgtcgacccg
gagtcgggcctgctgcccaacttcaaacgcaatgaaatcggcaacctgtccgatggcgaa
gggctcggcatgggcagtggtgccaaggcggcgccgctggtcaacccgaaaatggtcagc
aacatcgacaaggccagttcgctgggcgaagtcatcgccagcctctcggaccgcgacaac
ggcttcgagatcatgcttgagccgtcggcctacttcaccgatatcatcttcacgctggat
ggccaggagcagcactaccgcaacggcaagaccagctggagccgcttctcgtggcctggc
actaccacagcgccaggcgcacgcctggatgtggtcaccctgtcaggcgaacgcattacc
gtgttcgactacaccggccgctggggcctgctgcgcatgaacgacagcgcacgcgtcgct
gacctcgacggcatccagcagcgattcagctggaacacggccaaagggccggtcagtctg
gtggtacgcaactatggcggcgtgaagctgaccgacctggccaacgtcaaggcgctgagc
gcgcttaacgcaaccgatgggcggaccaagtga

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