Stutzerimonas stutzeri CCUG 29243: A458_01125
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Entry
A458_01125 CDS
T02168
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A458_01125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_01125
Enzymes [BR:
psc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A458_01125
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A458_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFM31487
UniProt:
I4CN30
LinkDB
All DBs
Position
229610..232912
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AA seq
1100 aa
AA seq
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MLSLYHAPDLETLGELATRLLAQPFADPFAPALVVVPSQGMGRWLTLELARKQGIAMQLE
IQLPAKFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCDPANLQLAPRLAQYLDGGDER
RRLSLAAKIADVFDQYLLYRDDWLAAWERGETFDLGPDEAWQALLWRELTKDGHPHRARL
LDDLLQRLYSDEPLPGLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCALNPSREAWGE
IRDIRELARQPESCAEDWYLDVGHPLLASLGKQGRDFFDSLFSLTASEGSQDFGLYSEDE
DLRDDSLLHALQNDILRLRTRQPDERITLAENDRSLEVHIAHSPLREVEILHDQLLARFA
ANPALTPDQVVVLTPDIERYAPFIEAVFAPREGSPRIPYSLADRSLRAEMPLIEAFLELL
MLAQSRFAAEEILAWLEQPAIARRAGIESDDLPLLRDWLREAGVRWGRDGSQRARLGLPD
ESAFTWRQGLDRLLLGFAAPPQLAGDHAPLLGEYWPLDALEGARGQLLGRLVEFVERLGT
LADQLARPRPLSEWADDLQILIDTLFDEREAGDTLLLLSQACAALRDQAQAADLTRPIEL
ELVHQQLSTALQQGGGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGF
DLIGRHPRRGDRARRLDDRYLLLETLLSAREALYLSYVGRDPRDNAVLPPSVLLSEVLEA
VDMTAVLPPADLASKSANEPAPKTVSQKILVAHPLQPFSPRNFGDAPCAGFSLPWFRAAQ
RLAEPPQTQPQPFASLLAEPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLA
SDEPFDLEMPAWNGLRRLSLQAMEHGWSDEDERRMACAAGWLPTGELGQALWGKLRGPVR
AFAPRLFELRPEAVPEPLPVDITLAGVRVHGWLDGVTPAGLFGWKLGRLGEWDLPPFWLR
HLLLNLSATPGIERQSLMLSPAGDWQLGPLANAAQLLEPWLAAYRCAIREPLPLLPRSSH
AFAKGYRKPARGSEPLDCARKRAREAWLGAEFSPIAAEAEDPWNALAFRDRDPLDERFET
LAEQLIGPALDALADEEQEE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctctaccacgcccctgacctcgaaaccctcggcgaactggccacgcgcctg
ctcgcccagccgttcgccgatcccttcgctccggcgctggtggtggtgccaagccagggc
atgggccgctggctgacgctggaactggcgcgcaagcagggcatcgccatgcagctggag
attcagctgccggccaagttcgtctgggacctgagccgtaccgtgcttggcagcctgccc
gaacaatcggcgttctctccgacgaccctgacctggcgcctctacggctggctctgcgat
ccggcgaatctccaactggcgccgcgtctggcgcagtacctcgatggcggcgacgagcgc
cggcggctgtcgctggcggcgaagatcgccgacgtcttcgaccagtacctgctctatcgc
gatgactggctggccgcctgggagcgtggcgaaaccttcgatctaggcccggacgaagcc
tggcaggcgctcctctggcgcgagctgaccaaggacggccatccgcaccgcgcccggctg
ctcgacgatctgctgcagcggctctacagcgacgaacccttgcccggcctgcccgagcgc
ctgctggtgttcggcatcagcagcctgccaccgcaccacctgcgcgtcctcgatggtctg
gcgcgacatatcgacgtggtagtctgcgcgctcaacccgagccgcgaagcctggggcgag
atccgcgatattcgtgaattggcgcgccagcccgagagctgcgctgaggattggtatctc
gatgtcggccatccgctgctggccagtctcggcaagcagggccgggacttcttcgattcc
ctgttcagcctgaccgccagcgagggcagccaggacttcggcctgtattccgaagacgaa
gacctgcgcgacgacagcctgctgcacgccttgcagaacgacatcctgcgcctgcgcacc
cggcagcccgatgagcgcatcacgctcgccgagaacgatcgttcgctggaagtgcatatc
gcccattcgccgctgcgcgaggtagagattctgcatgaccagttgctggcgcgcttcgcc
gccaacccggcgctgacgcccgatcaggtggttgtgctgaccccggatatcgagcgctac
gcaccctttatcgaagccgtgttcgccccacgcgagggcagcccgcggattccctacagc
ctcgctgaccgcagtctgcgcgccgagatgccgctgatcgaggccttccttgaattgctg
atgctggcgcagagtcgttttgccgccgaggaaatcctcgcctggctggagcagcccgct
atcgcccgtcgcgccgggatcgaaagcgacgacctaccgctgctgcgtgactggctgcgc
gaggctggggtgcgttgggggcgcgacggcagtcagcgggcgcgtctcggcctgccggac
gaatcagcctttacctggcgccaggggctcgaccggttgctgctaggctttgccgcgccg
ccgcaactggctggcgaccacgcgccactgctcggcgaatactggccgctggatgcgctt
gaaggtgcacgcgggcaactgctgggacggctggtggaatttgtcgaacgtctcggcaca
ctggccgatcaactggctcggccgcgtccgttgtccgagtgggccgatgacctgcaaatc
ctgatcgacaccctgttcgatgagcgcgaagccggcgacacgctgctcttgttgtcccag
gcctgcgcagcgttgcgcgatcaggcccaagctgcagacctgacgcgacccatcgaactg
gaattggtgcaccagcagctcagcaccgccctgcagcagggcggaggcgcctcgggcttt
ctcaccggtgcggtgaccttctgcaccatggtgccgatgcgcagcctgccgttccgcgtg
gtctgcctgctcggcctggacgatggggcgttcccgcggcgcacaccgccgtcgggcttc
gatctgatcggccggcatccgcgccgcggcgaccgtgcgcggcggctggatgaccgttac
ctgctgctggaaaccctgctctccgcgcgcgaggcgctgtacctgtcctatgtcggccgc
gacccgcgcgacaacgccgtgctgccgccttcggtgctgctcagcgaagtgctggaagcg
gtcgatatgaccgccgtgttgccgcctgctgatctagcatccaagagcgccaacgagcct
gcgcctaagacggttagccagaagatccttgtcgcccacccattacagccgttttctcca
cgcaatttcggcgacgcgccctgtgcgggtttttcgctgccctggttccgcgccgcccag
cgcctggccgagccgccgcagactcagccgcaacccttcgccagcctgctcgccgagccg
gacgaggcctggctgaccatcgaaccgtcgcagctgttgcagtgcttccgtcatccggcg
cgctttctgctcgagcagcgcctcggtttgcgcctggctgacgatcaggaatcgctcgcc
agcgacgagcccttcgatctggagatgccggcctggaacggcctgcggcgtctgtcactg
caggcgatggagcacggctggagtgatgaagacgaacgacgtatggcctgcgccgcaggt
tggttgccgacgggcgagttgggccaggcgctgtggggcaagctgcgcgggccggtgcgt
gcctttgcgccgcgcctgttcgaactgcgcccggaagcggtgcccgagccgctgccggtg
gacatcaccctggccggcgtgcgcgtgcatggctggctcgacggcgtaaccccggccggg
ctgttcggctggaagctcggccgcctcggcgaatgggacctgccaccattctggctgcgc
catctgctgctcaacctgtccgccacgcccggtatcgagcgccagagcctgatgctatcg
cccgccggtgactggcagctggggccgctggccaatgccgcgcagctgctggagccctgg
ctggcggcctatcgctgtgcgattcgggagccgctgccgttgttgccgcgtagcagccat
gcgtttgccaagggctaccgcaagccggcccgtggtagcgagccgctcgactgcgcccgc
aagcgtgcccgcgaagcctggcttggtgccgagttcagccccattgccgccgaagctgaa
gacccctggaacgccttggccttccgtgatcgcgatccgctggacgagcggttcgaaacc
ctggccgaacagctgatcggcccggccctggatgccctggccgatgaggagcaggaagaa
tga
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