Stutzerimonas stutzeri CCUG 29243: A458_01265
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Entry
A458_01265 CDS
T02168
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A458_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_01265
Enzymes [BR:
psc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A458_01265
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A458_01265
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A458_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AFM31513
UniProt:
I4CN56
LinkDB
All DBs
Position
265969..266781
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIEPYLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIQAVERRAKYL
LIKAESGTLIVHLGMSGSLRLVDSALPAAKHEHVDILLESGQALRYTDPRRFGAMLWSHE
PLAHVLLARLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEIRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
AGEFCKNCGGTLREIRLGQRASVYCARCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaactacccgccgtggtatcgagccataccttgttggt
cagcgtgtcagccgcgtgctggtgcgtgaccggcggttgcgctggccgataccggaagac
ctcgatgtgcgtctgtccggccaacgcatccaagccgtcgagcgtcgtgccaaatacctg
ctgatcaaggccgagagcggcacgctgatcgttcatctgggcatgtccggaagcctgcgt
ctggttgactcggcattgccggcggccaagcacgagcacgtcgatatcctgctggagtcc
ggccaggcgctgcgctacaccgatccgcggcgcttcggcgcgatgctctggagccacgag
ccgctcgcccatgtgttgctcgccaggctcgggcccgagccgctcggcgaggatttcgac
ggtgaccgtctgtataggctgtcgcgtgggcgcagcatggcggtcaagccgttcatcatg
gacaacgcggtagtggtgggagtcggcaacatctatgcgagcgaggcactgttcgccgcc
gggatcgatccgcggcggccggccgggagcatctcgcgagcgcgttatctgaagctcggc
gaggaaatccggcggatactggcgatggccatcgagcgtggcggcacgaccttgcgcgat
ttcgtcggcggcgatggcaagcccggctattttcaacaggagctgttcgtctacgggcgg
gccggcgaattctgcaagaactgcggcggcacgctgcgtgagattcgcctcggtcagcgc
gccagcgtgtattgcgctcgctgccagcgttga
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