Stutzerimonas stutzeri CCUG 29243: A458_01780
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Entry
A458_01780 CDS
T02168
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psc03009
]
A458_01780
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A458_01780
Ribosome biogenesis [BR:
psc03009
]
Prokaryotic type
rRNA helicases
A458_01780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFM31612
UniProt:
I4CNF5
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All DBs
Position
complement(377419..378798)
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AA seq
459 aa
AA seq
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MPSTAFSSLPLSAAMLANLEALGYAAMTPIQAQSLPVMLKGHDLIAQAKTGSGKTAAFGI
ALLDPLNPRYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVSIGPQIASL
EHGAHVIVGTPGRVQEHLRKGTLKLDGLNTLVLDEADRMLDMGFYDAIADIIGQTPAKRQ
TLLFSATYPAGIKQLSASFMRDPQQVRAEALHDDAQIEQRFYEIDPEQRMDAVLRLLASF
RPESCVAFCFTKQQCQELVDHLIANGISAMALNGDLEQRDRDQVLAMFANRSLSVLVATD
VAARGLDIDALDMVINVELARDPEIHVHRVGRTGRAGNQGLAMSLVAPAEAHRAQAIEKL
QQAPLNWQPLDGLKAKTGAPLQPPMATLCIGAGRKDKLRPGDILGALTGDAGIPGTQVGK
IAIFDFQAFVAVERGVAKQALKRLNEGKIKGRSLKVRVL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagtaccgccttttcttccctgcccctttctgccgccatgctggcgaacctcgaa
gccctcggctacgcggcgatgacgccgatccaggcgcagagcctgccggtcatgctcaag
ggccacgacctgatcgctcaggccaagaccggcagtggaaagaccgccgcattcggcatc
gccctgctcgacccgctcaatccgcgttatttcggctgccaggcgctggtcctgtgcccg
acgcgcgagctggccgatcaggtcgccaaggagctgcggcggctggcgcgcgcggcggac
aacatcaagatcctcacgctgtgcggcggcgtctccatcggtccgcagatcgcttcgctg
gagcatggtgcgcacgtcatcgtcggcacgccgggccgggtccaggaacatctgaggaaa
ggcacgctgaaactcgacgggctgaacaccctggtgctcgatgaagccgatcgcatgctg
gacatgggcttctacgacgccatcgccgacatcatcggccagacaccggccaagcggcag
accctgctgttctcagccacctaccccgccggcatcaagcagctgtccgcaagcttcatg
cgcgacccgcagcaagtgcgtgccgaagccctgcatgacgatgcacagatcgaacagcgc
ttctacgaaatcgaccccgagcagcgcatggacgcggtcctgcgcctgctcgccagcttc
cgaccagaaagctgcgtggcgttctgcttcaccaagcagcagtgccaggagctggtcgat
cacctgattgccaacggcatctcggccatggcgctcaatggcgatctggagcagcgtgac
cgcgaccaggtgctggcgatgttcgccaaccgcagcctctcggtgctggtggcgaccgat
gtcgccgcgcgcggcctggatatcgatgcgctggacatggtgatcaacgtcgagctggcc
cgcgacccggagatacatgtacaccgggtcggtcggaccggccgcgccggtaatcagggc
ctggccatgagcctggtcgccccggccgaagcccatcgcgcgcaagccatcgaaaagctg
cagcaggcaccgctcaactggcagccactggacgggctcaaggccaagaccggcgcgcca
ttgcaaccaccgatggcgactctgtgcattggagcgggccgcaaggacaagctgcgcccg
ggcgacatcctcggtgcactgacgggtgatgccggcatccccgggacccaggtcggcaag
atcgccatcttcgacttccaggcgttcgtcgctgtcgagcgcggcgtcgccaagcaggca
ctcaaacgcctgaacgaaggtaagatcaagggccgctcgctaaaggtccgcgtcctctga
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