Stutzerimonas stutzeri CCUG 29243: A458_07270
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Entry
A458_07270 CDS
T02168
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psc03016
]
A458_07270
Enzymes [BR:
psc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A458_07270
Transfer RNA biogenesis [BR:
psc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A458_07270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AFM32700
UniProt:
I4CRJ3
LinkDB
All DBs
Position
1565115..1566239
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AA seq
374 aa
AA seq
DB search
MAIETQWVLDDEHLTRLCAEWRQLPYVAVDTEFMRVDTFYPIAGLIQVGDGRRAYLIDPL
SVRDWSAFAALLQDPAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGY
SRLVQAVLGIELPKGETRSDWLQRPLSDMQVRYAAEDAQHLAELYEALLPKLSEDKRAWV
LEDGAELVANLQRESDPDEAYRDVKQAWRLKPQQLAVLKVLAAWRERQARARNQPRNRVL
REASLWPLARTQPRDLVTLARIEDMHPRTVRQDGELLLEMIREAAATPEQDWPAPLPEPL
PLEVSSVLKKLRAVGQREAQALDIAPELMLRKKTLEALLKSGYPDGPYELPESLRGWRRE
RMGQALLDALEKRP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtggctatcgaaactcaatgggttctggatgatgagcatctgacccgcctgtgcgccgaa
tggcgccagctgccctatgtggcagtggataccgaattcatgagggtcgataccttctac
cccatcgccgggctgatacaggtcggtgacgggcggcgtgcctatctgatcgacccgctg
agcgtacgtgactggtccgcgtttgccgcgttgctgcaagacccggcggtggtgaaagtg
ctgcacgcctgcagcgaagacctcgaagtactgctgcgtctgaccggtagcctgccgcag
ccgctgttcgacacccagctggcggccggttacctgaatatcggtttctccatgggctac
tcgcggctggtccaggcggtactcggcatcgagttgcccaagggcgaaacgcgctcggac
tggttgcagcggcctctgagcgacatgcaggtgcgatatgccgccgaggatgcccagcat
ctggccgaattgtacgaagcactgctgccgaagctgtccgaggacaagcgtgcctgggta
ctggaggatggtgccgagctggtcgccaacctgcagcgcgaatccgatcccgatgaagcc
taccgtgatgtgaagcaggcctggcggctcaagccgcagcagctcgccgtgctcaaagtg
ctggcggcctggcgcgagcgtcaggcccgtgcgcgcaaccaaccgcgcaatcgcgtgctg
cgtgaagccagtctctggccgctggcgcgcacccagccgcgcgatctggtgacgctggcc
cggatcgaggacatgcatccgcgtaccgtgcgccaggatggtgaattgctgctggagatg
atccgtgaggccgcggcgacgcccgaacaggattggccggcaccgctaccggagccattg
ccgctggaggtgtcgtccgtactgaaaaagctgcgtgcggtcggccagcgcgaagctcag
gcgctggatatcgcaccggagctgatgttgcgcaagaaaacgctcgaggcgctgctcaag
agcggctaccccgatggaccctatgaactgcccgaatcgctgcgcggctggcgccgtgag
cggatggggcaagccctgctcgatgctctggaaaaacgaccatga
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