Stutzerimonas stutzeri CCUG 29243: A458_10210
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Entry
A458_10210 CDS
T02168
Name
(GenBank) rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A458_10210
09124 Replication and repair
03420 Nucleotide excision repair
A458_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psc03021
]
A458_10210
03036 Chromosome and associated proteins [BR:
psc03036
]
A458_10210
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_10210
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A458_10210
Transcription machinery [BR:
psc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A458_10210
Chromosome and associated proteins [BR:
psc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
A458_10210
DNA repair and recombination proteins [BR:
psc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A458_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AFM33279
UniProt:
I4CT72
LinkDB
All DBs
Position
2225749..2228028
Genome browser
AA seq
759 aa
AA seq
DB search
MSYRVAVRALCEFTAKVGDLDLRFTPSPTALEGIAGHAQVSARRGEGYEREVALEGQYGK
LMVRGRADGYDPARNRLEEIKTFRGDLERQPANHRQLHWAQARIYGWLLCQTRQLDEVEL
ALVYFDVASHKETQFVERHAAAQLRAFFETQCQAFLDWAEQELAHRDARNQALTTLGFPH
ADFRTGQRQLAEAVYKAACTGTTLMAQAPTGIGKTLGTLFPQLKAFPGQQFDKLFFLAAK
TSGRRLALDALQTLQRNGAGELRVLELIARDKACEHPDKACHGESCPLAKGFYDRLPAAR
AAALQHSMLDQATLREVALAHQVCPYYLSQELARWADAVVGDYNYYFDISALLYGLTLNN
DWRISVLVDEAHNLLERARGMYSAELDQRAFAGLGGKAPAPLKRPLGRVQRCWNELHREQ
PANYQVQPELPLKLLGALQQAVSAVTDYLGEQPGRLDAELQRAYFDAMHFCRIAEQFGEH
SLFDISLLPATGRGKTKRSMLCLRNVVPAPFLAPRLEQARSTVLFSATLNPRRFHADMLG
LPTGSAWIEVESPFQADQLRVCLAEHVSTRYQHRQASLGAVVELIAQQYRERAGNYLAFF
SSFDYLQQVTALLREQYPDVPFWEQTRGMQEAARSAFLDRFTEHSKGVGFAVLGGAFAEG
IDLPGNRLIGAFIATLGLPQVNPVNEQFKARLEQLFGRGLGYDYTYLYPGLQKVVQAAGR
VIRTQSDEGVVHLIDDRFGRSQIRRLLPSWWQLSPVSSD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgagctatcgggtcgcggtgcgcgcgctctgcgaattcaccgccaaggttggcgatctg
gacctgcgcttcacgccctcgcccaccgcgctggaaggcatcgccggccacgctcaggtc
agcgccaggcgcggcgagggctacgaacgtgaagtggctctggagggccaatacggaaaa
ctcatggtgcgcggccgcgccgatggctacgacccggcgcggaatcgcctggaggaaatc
aagaccttccgcggtgatctggaacgtcagccggccaaccatcggcagttgcactgggcg
caggcgaggatctacggctggctattgtgccagacacgccagctcgacgaggtcgagctg
gcactggtctatttcgacgtcgccagtcacaaggaaacgcagttcgtcgagcgccacgcc
gcagcgcagctacgcgcattcttcgaaacccagtgtcaggcgtttctcgactgggccgaa
caggaactggcccatcgcgacgcacgcaatcaggcgctcaccacgctgggctttcctcat
gccgatttccgcaccggccagcggcaactcgccgaggcggtatacaaggcggcctgcacc
ggcaccacgctcatggcgcaagcgccaaccggtatcggcaagaccctgggcacgctgttt
ccgcaactcaaggcgtttcccggtcagcagttcgacaagctgttctttctcgctgccaag
acctccggccgccgcctggcgctggatgcactgcaaacgctacagcgcaacggcgcgggt
gaattgcgtgtgctcgaactgatcgcgcgtgacaaggcctgcgagcacccggacaaggcc
tgtcacggcgaatcctgcccgttggcgaagggtttctatgatcgtttgcccgcggcccga
gcagcggcattgcagcacagcatgctcgaccaagcgaccctgcgagaggtcgccctcgcc
catcaggtctgcccctattacctcagccaggagctggcgcgctgggcggacgccgtggtc
ggcgactacaactactatttcgacatcagcgccctgctctacggcctgacgctcaacaat
gactggcgtatcagcgtgctggtggacgaagcgcacaacctgctcgaacgcgcgcgcggc
atgtacagcgccgagctcgatcagcgggccttcgccggtctcggcggcaaggcgccggcg
cccttgaaacgcccgctgggtcgggtacagcgctgctggaacgagctgcatcgcgagcag
ccggcgaattatcaggtgcagcccgagctaccgctcaagctgctcggcgcgctgcaacag
gccgtcagcgccgtcaccgattaccttggcgaacagcccggcaggctggatgcagagctg
caacgggcctatttcgatgccatgcatttctgccggatcgccgaacagttcggcgagcat
tcattgttcgatatcagcctgttacccgcaactggccgcggcaagaccaagcgttcgatg
ctgtgcctgcgcaatgtggttccggcacccttcctcgcgccacggttagaacaggctcgt
tcgacggtgctgttctcggccacgctgaacccgcgccggttccatgccgatatgttgggc
ctgcccacgggtagcgcctggatcgaggtcgaatcgccattccaggccgatcagctgcgg
gtatgcctggccgagcatgtctcgacccgctatcagcaccgccaggcctcgctgggtgcc
gtggtcgagctcatcgcccagcaatatcgcgagcgcgccggcaactacctggcgttcttc
agcagctttgattacctgcaacaggtgactgccctgctgcgcgagcagtatccggacgtg
cccttctgggagcagactcgcggcatgcaggaagccgcccgcagtgcatttctcgaccga
ttcaccgaacacagcaagggcgtcggttttgcggtgctcggcggcgcattcgccgaaggc
atcgacctgccaggcaaccgcttgattggcgcttttatcgccaccctcggcctgccacag
gtcaatccggtcaacgagcagttcaaggcacgccttgagcagctattcggccgcggcctg
ggttacgactacacctacctctaccccgggctgcagaaagtcgtgcaggctgcggggcgg
gttatccgcacacagagcgatgaaggcgtcgtgcacctgatcgacgaccgtttcggccgg
tcgcagatacgccgcctgctgccgagctggtggcagctttcgccagtttccagcgactga
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integrated database retrieval system
