Stutzerimonas stutzeri CCUG 29243: A458_12140
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Entry
A458_12140 CDS
T02168
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psc03032
]
A458_12140
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_12140
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A458_12140
DNA replication proteins [BR:
psc03032
]
Prokaryotic type
DNA Topoisomerases
A458_12140
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A458_12140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AFM33663
UniProt:
I4CUA6
LinkDB
All DBs
Position
complement(2659041..2661644)
Genome browser
AA seq
867 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSANKEPVKRGKAAAAEAPA
LSPKEKAKRQLITRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKEADTIYLATDLDREG
EAIAWHLRESIGGDDSRYKRVVFNEITKKAIQEAFSKPGDLDLNRVNAQQARRFLDRVVG
YMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLANAQQAKVRF
EVARENGEAFKPLSEAQANAALEKLKGAKYSVSKREDKPTSSKPSAPFITSTLQQAASNR
LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIGMVRGFIENEFGDKYLPEKPNVYS
SKEGAQEAHEAIRPSDVNLRPTQLSGMERDAERLYELIWRQFVACQMPPAQYLSTSVTVA
AGNFELRAKGRILKFDGYTKVMPQQSKAGEDDVLPEMNKGDDMKLLKLDPSQHFTKPPAR
YSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYSEKMGDIVTERLSESFNN
LMDYGFTAGMEEHLDDVAQGERDWKHVLDEFYGDFRKKLEVAEASENGMRANQPTVTDIP
CKVCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLVPGDEIAADDEGESESRVLLGK
HRCPICSTAMDAYLLDETQKLHICGNNPDCSGYEIEKGQYRIKGYEGPSLECDKCGSEMQ
LKTGRFGKFFGCTNAECKNTRKLLKNGEAAPPKMDAVKMPELKCDKVDDTYVLRDGASGL
FLAASQFPKNRETRAPLVRELIPHKDEIDPKYHFLLDAPQKDPEGRFAVIRFSRKTKEQY
VQTEVDGKPTGWKAFYDGGKWKVEDKR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatcaccggccaaggccaagacaatcaacaagtat
ttgggcaaccagtacgtggtgaagtcgagtatcggccatatccgcgaccttcctaccagc
ggctctgccaacaaggagccggtcaagcgcggcaaggctgcggccgccgaagcgcctgcg
ctgtcgccgaaggagaaggccaagcgtcaactcatcacccgcatgggggtcgacccggag
cacggctggaaggccaagtacgagatcctgcccggcaaggaaaaggtcatcgaggaactg
cgccgtctggccaaggaagccgacaccatctatctcgcgaccgacttggatagagagggg
gaggccatcgcctggcacctgcgcgagtcgattggcggtgatgacagccgctacaagcgc
gtggtgttcaacgaaatcaccaagaaggcaattcaggaggcgttctccaagcctggcgat
ctcgatctgaaccgggtcaacgcgcagcaggcacgtcgtttcctcgatcgtgtggtcggc
tacatggtgtcgccgctgctctgggcgaaaatcgcccgtggtctctcggcaggccgggtg
caatcggtagcggtgaagctggtggtcgagcgcgagcgcgagatccgtgccttcgtcccg
gaagaatactgggaagtgcatgcggacctggcgaacgcccagcaggccaaggtgcgcttc
gaggtcgcccgcgaaaacggtgaggccttcaaaccgctgagcgaggcgcaggcgaatgcc
gcactcgagaagctcaagggcgccaagtacagcgtcagcaagcgtgaggacaagccgacc
agcagcaagccgtcggcacctttcatcacttcgaccctgcagcaggcagcgagcaatcgc
ctcggcttcggcgtgaagaagaccatgatgatggcccagcggctctacgaggccggctac
atcacctacatgcgtaccgactctaccaacctgtcggccgacgccatcggcatggtgcgt
ggcttcatcgagaacgagttcggcgacaagtacctgccggaaaagcccaacgtctattcg
agcaaggagggcgcccaggaggcgcacgaggcaatccgcccgtccgacgtcaacctgcgt
ccgacccagctttcgggcatggaacgtgatgccgagcgtctgtacgagctgatctggcgc
cagttcgtagcctgccagatgccgccggcacagtacctgtccaccagcgtgaccgtcgct
gccggcaatttcgaactgcgcgccaagggccgcatcctgaagtttgacggttacaccaag
gtcatgccgcagcagagcaaggccggtgaggatgacgtgttgccggagatgaacaagggc
gacgacatgaagctgctcaagctcgacccgagccagcacttcaccaagccgccagcgcgc
tactccgaagccagcctggtcaaggagatggagaagcgcggtatcggccggccgtccacc
tacgccgcgattatctcgaccatccaggaccgcggctacgtctcgctgcacaaccgccgt
ttctattcggagaagatgggcgacatcgtcaccgagcgcctgtccgaaagcttcaacaat
ctgatggactacggtttcaccgccggcatggaagagcatctggacgacgtcgcccagggt
gagcgcgactggaagcacgtactggacgaattctacggtgacttccgcaagaagctcgag
gttgccgaggccagcgagaacggcatgcgtgccaatcagccgaccgtgaccgatatcccg
tgcaaggtctgcggtcggccgatgatgatccgtaccgcttccaccggcgtgttcctcggc
tgctccggctacagcctgccgccgaaggaacgctgcaagtccactgtcaacctggttccg
ggcgacgagatcgctgccgatgacgagggcgagtccgagtctcgcgtgctgcttggcaag
caccgctgcccgatctgcagtaccgcgatggatgcctatctgctcgacgagacgcaaaag
ctgcacatttgcggcaacaacccggattgctcgggttatgagatcgagaaaggccagtac
cgcatcaagggctatgagggcccgagcctggaatgcgacaagtgcggcagcgaaatgcag
ctcaagaccggccgcttcggcaagttcttcggttgtaccaacgccgaatgcaagaacacc
cgcaagctgctgaaaaatggcgaagccgcgccaccgaagatggatgcggtgaagatgccc
gagctcaagtgcgacaaggtcgacgacacctacgtactgcgcgatggcgcttccggcctg
ttcctggctgccagtcagttcccgaagaatcgcgaaacccgcgcgccgctggtgcgtgag
ctgatcccgcacaaggacgagatcgatcccaagtaccacttcctgctcgatgcgccgcag
aaggatccggaaggccgcttcgcggttatccgcttcagccgcaagaccaaggagcagtac
gttcagaccgaagtggacggtaagccgaccggctggaaagccttctacgacggcggcaag
tggaaggtcgaagacaaacgctga
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