Stutzerimonas stutzeri CCUG 29243: A458_13115
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Entry
A458_13115 CDS
T02168
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A458_13115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psc03019
]
A458_13115
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_13115
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A458_13115
Messenger RNA biogenesis [BR:
psc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A458_13115
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A458_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
HTH_23
HTH_7
ResIII
HTH_20
GerE
HTH_29
PAX
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AFM33854
UniProt:
I4CUU7
LinkDB
All DBs
Position
complement(2877700..2879823)
Genome browser
AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLREGLA
VVVSPLIALMDDQVATLDELGVSAVALNSTLSADEQREIAERIRRSEIKMLYLAPERLVQ
PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPGVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK
VDDLAAFLSEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQTLLAYFDEELPKPCGHCDNCVDGVQTWNATEPARQALSAIYRSG
QRYGVGHLVDILLGRDNDKVRGLGHQHLSVFGMGRALAEAEWRSLFRQLVARGLADVDLD
GFGGLRLSDSCRPLLRGEVSLELRRDLTSKAPKPAASAASQLVRSEERETWEALRTLRRK
LAEEHGVPPYVIFPDATLLEMLRSQPASLSDMATISGVGARKLERYGQAFLEVLQGSVEV
AKSPADLRHELITLARAGMTPAQIARQLDCSEKNVYAMLAEAIGLQQLSLEQALDLPEDL
LGEIQEAFLDGEGELPPVSAVAEQFAGRVPEQVLYCVRAALQVEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatccttaaagacgtattcggctacgacgcgtttcgtggc
aaccagggcgcgatcatcgagcgtgtcggcagtggcggcgatgcgctggtactgatgccg
accggcggcggcaagtccctgtgctaccaggttccggcgctcttgcgcgaaggactggcg
gtggtggtttcgccgctgatcgcgctgatggacgaccaggtcgcgacactcgacgagctg
ggcgtctcggccgttgcgctcaactcgacgctgagcgccgatgagcagcgcgagatcgct
gagcgcatccggcgcagcgagatcaagatgctctatctcgcgcctgagcggctggtgcag
ccccgcatgctggcgttcctgcagcggctggagatcgccctgtttgccatcgacgaggcc
cattgcgtctcccagtgggggcacgacttccgtcccgagtacatgcagctgggccagctg
gccgaactgtttcctggcgtgccgcgtattgcgctgaccgcgacggcggacaagcggacg
cgggaagaaatcgtccagcgtctgcatctggagaacgccgaacggtttctctccagtttc
gaccgaccgaacatcttctatcgcatcgtgcccaaggagcagccgcgcaagcagctgctg
ggttttctagccgaacgccgcggcgatgccggcattgtctattgcatgtcgcgcaagaag
gtcgatgacctggctgcgttcctcagcgagcagggctttccggcactgccataccacgcg
ggcctgcccaacgagctgcgcgcctatcaccagaagcgtttcctcaacgaggaaggcctg
atcatggttgcgaccatcgccttcggcatggggatcgacaagcccaacgtgcgcttcgtc
gcccacctcgatctgcccaagtcgctggaagcctactatcaggaaaccggacgggcaggg
cgcgacgggctgcctgccgacgcctggatggcctatggcctgcaggatgtgatcttcctc
aagcagatgctcaacaactcagagggtgatgagcggcacaagcgggtcgagcagcacaag
ctcgatgccatgctggcgctttgcgaggaaacccgctgccggcgccagacgctgctcgcg
tatttcgatgaagagctgcccaagccctgcggtcattgcgacaactgcgtcgatggcgtg
cagacctggaatgccaccgagcccgcccgtcaggcgctatcggcgatctaccgcagcggc
cagcgttacggcgtcggccatctggtggacatcctcctcggacgggacaatgacaaggtc
cgcggcctgggccatcagcatctgtcggtgttcggtatgggcagggcgctggctgaggct
gagtggcgttcgctgtttcgccagctggtggcgcgcgggctggcggacgtcgacctggat
ggtttcggtgggctgcgtctgagtgacagctgccggccgttactgcgtggagaggtgagc
ctcgaacttcgccgagatctgaccagcaaggcaccgaagccggcagctagtgccgccagc
cagctggtgcgcagcgaggaacgggaaacctgggaagcgctgcgcaccttgcgccgcaaa
ctggccgaagaacacggtgtgccgccgtatgtgattttcccggatgccacgctgctggag
atgctgcgcagccagccggcctcgctgtcggacatggccaccatcagcggtgtcggcgcg
cgcaagctggagcgctacggtcaggccttcctggaggttctgcaaggcagcgtcgaagtg
gccaagtcacctgccgatctgcgacacgaattgatcacgctggcgcgcgcaggtatgacg
cctgcacagatcgcgcgtcagctcgactgcagtgagaagaacgtctacgcgatgctcgcc
gaagccatcggtctgcaacagctgagcctggaacaggcgctggatctgcccgaggatctg
ctcggggaaatccaggaggcctttctcgacggcgagggcgagctgccaccggtgagcgcc
gtggccgagcagttcgctgggcgggtacccgaacaggtgctttattgcgtgcgtgccgca
ctgcaggtcgagttcgaattgtaa
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