Stutzerimonas stutzeri CCUG 29243: A458_17415
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Entry
A458_17415 CDS
T02168
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A458_17415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psc03019
]
A458_17415
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A458_17415
Messenger RNA biogenesis [BR:
psc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A458_17415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AFM34708
UniProt:
I4CXA1
LinkDB
All DBs
Position
complement(3746513..3747838)
Genome browser
AA seq
441 aa
AA seq
DB search
MTFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFAALPKKR
QTLLFSATFSEPIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
DKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE
TLINQVLQRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDGGGKGKIHLGNWFDESEK
PNAKPIRKVPSLGGGKPGKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctccctgggcctgatcgatccgctgctgcggaccctggaaaccctcgat
taccgcaagccgacgccggtgcagatcgaagccattcccgccgtgctcaagggccgcgac
ctgatggcggcggcgcagaccggtaccggcaagaccgccggcttcgccctgccgttgctg
cagcgcctgaccatggaaggcgccaaggtggcgagcaattcggtgcgcgcgctggtactg
gtgccgacccgcgagctggccgagcaagtccatgagagttttcgcgtctacgggcagaac
ctgccgctgcgcacctacgcggtgtacggcggggtcagcatcaacccgcagatgatggcg
ctgcgcaagggcatcgatgtgctggtggcgacgcccggtcgcctgctcgatctctaccgg
cagaacgccgtgggcttcaaccagctgcaggcgctggtgctcgacgaggccgatcgcatg
ctcgacctcggtttcgccgacgagctggaccagctgttcgccgccctgccgaagaagcgc
cagaccctgctgttttccgcgaccttttccgagccgatccggcagatggcccgcgagctg
ctgcgcgatccgctgtcggtcgaggtcagcccacgcaacgccgcggcgaagacggtcaag
cagtggctggtgccggtggacaagaaacgcaagagcgagctgttcctgcatctgctggcg
gacaagcgctggggccaggtgctggtgttcgtcaaaacacgcaagggcgtcgatcagctg
gtggacgagctgcaggctgcgggcatttccagcgatgcgatccacggcgacaagccacag
gcctcgcgcctgcgtgcgctggagcgcttcaaggcgggcgaggtgcaggtgctggtggcg
accgacgtcgccgcgcgcgggctggacatccatgatctgccgcaggtggtcaacttcgac
ctgccgatcgtcgccgaggattacgtgcaccgcatcggccgcaccggtcgggcaggtgcc
acgggcgaggcggtatcgctggtcagcgccgatgaggtcgatcagctcgccgctatcgaa
accctgatcaaccaggtgctgcagcgccacgacgagctgggcttcgtgcctgaccatcgt
gtgccgaccaccacgctgggtgggcagatcatcaagaagccgaagaaaccgaaaaagccc
aaggacggcggcggcaagggcaagattcacctcggcaattggttcgatgaaagcgaaaag
cccaatgccaaacccatccgcaaggtgccgagcctgggcggtggcaagccgggcaagaag
cgctga
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