Stutzerimonas stutzeri CCUG 29243: A458_17595
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Entry
A458_17595 CDS
T02168
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_17595
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A458_17595
Archaeal homologous recombinant proteins
A458_17595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
XhlA
ABC_tran
nSTAND3
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFM34744
UniProt:
I4CXD7
LinkDB
All DBs
Position
3786441..3790094
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRLKNLASLAGEQTIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPDVEAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVRRAKEKI
DGKLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKQAKESLTRLEQQAGGLKPLEPEQRDVLERE
HQTQLEDLKQLQQQLKELEAQRQWLSELQRLENEREAARQQLQDAEGERESLTEARRILD
LFERLAPQRHRFLRQQELEPLLGKAAESLTRLQHEAQSLQQRLDTLQSQCEAAGNDLRAA
DQARQTAEPRLAQARREEERLSHLNADLASIREESVQADAAASTGEATLKQLAEQQQRAA
EQLAALTQQLETSAALQPLCAAWGGYRPRLQQAVQLAARLQQGQGELPALEAQAKAAETR
QSQAREALDSLQRERDSHVGLAEQLAQLHQQLDEWRQAERETEALRELWAQQLTLTASQR
ELSDAHIRQQAELDSLVPQGKQLRSDRDAAEQALKVTLALLERQRLARGENVEALRAALV
PGEPCPVCGSDEHPWQQTDALVASLDRHDDSEAERARQSLQEQDQRLQELRDRHVALSTQ
LRQTQQRQGEVEAQLQALAPRLLALPAHSRLLEQPEAERSQWLEAQLTTLKDQIANTSQR
QQQLLALQQRSETLQQAWQAAREACVETTQQLARQRDALAHDSQQLDEELQAFAELLPAD
QLQRWRENPAQTFMQLDASIATRLQQLQQQSELAEELRQCEQRRSDEQLQQRHRQEKQAG
CSVRLSEREKLLLACQQALRTSLGEQTSASAWQQQLDATIQAARQTQAEIDRQLNESKIG
LTRLHSEQQNCRQRQAELEQERDALNAELATWRTSHPQLDDTTLAQLLHMDDQLIAEARQ
RLQQNAETLTRCRERLDGCLSRLNTHKLQQAETPDIERLQQRHAEQLQQCEQADQHCAET
RAQLIDDDKRRSQSQALLAQIDAARAEHQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLKIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
RRQGNGQSDLQIVGGLS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaagaacctggcctccttggccggcgaacagaccatc
gatttcaccgccgaacccctggccagcgctggcctgttcgccatcaccgggcctacaggt
gcgggcaagagcaccatcctcgacgccctgtgcctggcgctatttggcagcacgccgcgg
ctcgacagcgtctcacctctgaacaaggtacccgacgtcgaagccgagatcggcggcggc
gacgagcgcaacctgctgcgccgcggttgtggcagcggctacgcagaggtggatttcgtc
ggcgtcgacggccaccgctaccgcgcgcgctgggaggtcaggcgtgccaaagagaagatc
gacggcaaactgcaggccagcagccagagcctcaccgatctggacagcggcacgctgctg
gccagcggcaagaagcgcgaattcaaggaactgctcgaagcacgcctggggctgaccctg
gcccagttcacccgcgccgtgctgctggcgcagagcgagttttccgccttcctcaaggcc
gacgacaacgagcgcggcaccctgctggaaaagctcaccgacaccgggctctacagccgc
ctcggccaggctgccttcgaggccgccaagcaggccaaggaaagtctcacccgcctggaa
cagcaggccggcggcttgaagccgctggagcccgagcagcgcgatgtactggagcgcgag
catcaaacccagctggaagacctgaagcagctgcaacagcagctcaaggaactggaagcc
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgcgaagcggcacgccag
caactgcaggacgccgaaggcgagcgcgagagcctgaccgaggcccgccgtattctcgac
ctgttcgaacggctcgcaccgcagcgccatcgttttctgcgtcagcaggaactcgaaccc
ctgctcggcaaggccgccgaaagtctcactcgcctgcagcacgaggcgcaaagcctgcag
caacgtctcgacacattgcagagccaatgcgaagcggccggcaacgatctgcgtgcggcc
gatcaggcgcgccagacggccgagcccaggcttgcgcaagcgcgccgtgaagaggaacgc
ctcagccatctgaacgccgacctcgcctcgatccgcgaagaaagcgtccaggccgatgct
gcggcgagcaccggcgaggcaacgctcaagcagctcgccgagcagcaacagcgcgccgcc
gaacagctagcagcgctgacgcagcaactcgagacgagcgcagcgctgcaaccgctctgt
gcagcctggggcggttaccgtccgcgtctgcaacaggccgtccagctggcggcacggctg
cagcaaggtcagggcgaactcccggcactggaagcgcaggccaaggctgccgaaacccgg
caaagccaggcgcgcgaggcgctggatagcctgcaacgcgagcgcgacagccatgtcggc
ctggccgaacagctggcccagctgcatcaacagctcgacgaatggcgccaggccgagcgc
gaaaccgaggccctgcgcgaactctgggcgcagcagctcacgctcaccgccagccagcgc
gaactgagcgacgcccacatccgccagcaggccgagctggacagcctggtaccgcagggc
aaacagcttcgcagtgaccgtgatgctgccgagcaggcgctcaaggtcaccctcgccctg
ctcgaacgccaacgcctggcacgcggcgagaatgtcgaagcgctgcgtgcggcgctcgtc
cccggcgagccctgcccggtctgcggcagcgacgagcatccctggcagcagaccgatgcg
ctggtcgccagcctcgaccgacacgacgacagcgaggccgagcgcgctcgccagtcgctg
caggaacaggaccagcgtctgcaggaactgcgcgatcgccatgttgcgctcagcacgcag
ttgcgccagacgcaacaacgccagggcgaagtcgaggcgcagctgcaggccctggcaccg
cgcctgctcgccctgcccgcacactcgcgattgcttgagcagccggaagccgagcgttcg
caatggctggaagcgcagctgacgacactcaaagaccagatcgccaacaccagccagcgt
cagcagcagttactcgccctgcaacagcgcagcgaaaccctgcagcaggcctggcaggcc
gcgcgcgaagcctgtgtcgagacgacccagcaactcgcccgccagcgcgatgccctggcc
cacgacagccaacagcttgatgaggaactgcaggcgtttgccgagctgttgcccgccgac
cagctgcaacgctggcgcgaaaaccccgcgcagacctttatgcagctggacgccagcatc
gccacgcggctgcaacagctgcaacagcagagcgagctggccgaggagctgcgccagtgc
gagcagcgccgcagcgacgagcagctgcagcagcgccatcgccaggagaaacaggcaggc
tgcagcgtacgactgagcgagcgcgagaaactgctgctggcctgccagcaggcgctgcgt
accagccttggcgaacagaccagcgccagcgcctggcaacagcagctggacgcgaccatc
caggctgcgcggcaaacccaggccgagattgatcggcagctcaacgagagcaagattggc
ctgacgcggctgcacagcgagcagcagaactgtcgccagcgccaagccgaactggaacag
gaacgcgacgcgctgaatgcggaactggccacctggcgcaccagccacccgcagctggac
gacaccaccctcgcccagctgctgcacatggatgaccagctgattgccgaggcgcgccag
cgcctgcaacagaacgccgaaaccctgacccgctgtcgcgagcgtctggacggctgcctc
agtcgcctgaacacgcacaaactgcagcaggccgaaacgccggacatcgaacggctgcag
cagcgccatgccgagcaactgcagcaatgcgagcaggccgaccagcactgcgcggaaacc
cgcgcccagctgatcgacgacgacaagcgccgcagccagagccaggcgttgctcgcgcag
atcgacgccgcacgggccgagcatcagcgctgggggcgcatcgccgccttgatcggctcc
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcag
cacgccaatgtgcagctgcgccaactggcccggcgctatcggctcaagcgcggcggcagc
ccgctggggttgttggtgatggataccgaaatgggtgacgagctgcgctcggtgcattcg
ctgtccggcggcgaaaccttccttgtctcgctggccctggcgctgggcctggcctcgatg
gcgtcgagcaagctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgat
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaggcccagggccgcaag
gtggcggtgatctcccatgtggcggaaatgcacgagcgcattccagtgcagatccaggtg
cgccggcagggcaatgggcagagtgatctacagattgtcggggggctttcataa
DBGET
integrated database retrieval system
