Stutzerimonas stutzeri CCUG 29243: A458_18840
Help
Entry
A458_18840 CDS
T02168
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc00300
Lysine biosynthesis
psc00470
D-Amino acid metabolism
psc01100
Metabolic pathways
psc01110
Biosynthesis of secondary metabolites
psc01120
Microbial metabolism in diverse environments
psc01230
Biosynthesis of amino acids
Module
psc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A458_18840 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A458_18840 (dapF)
Enzymes [BR:
psc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
A458_18840 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AFM34991
UniProt:
I4CY34
LinkDB
All DBs
Position
4054093..4054923
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVIDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEPPQNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVVDKRLTVKRKIKVETKGGIIELDIRPDGQIRVDM
GPPRLVPSEIPFQADQEALSYPLEVDGQRVELAAVSMGNPHAVLRVDSVEQAPVHELGPK
IEHHPRFAQRVNVGFLQVVDRRHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QIELPGGRLSIEWAGPGQPVMMSGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgctttaccaagatgcacggtctgggcaacgacttcatggtcatcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcagtggggcgatcgccacacc
ggagtcggtttcgatcagctgctgatcgtcgagccgccgcagaacccggacgtggatttc
cgctaccgcatcttcaattccgacggttcggaagtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtggtcgacaagcgcctgaccgtgaaacgcaagatcaaggtcgaa
accaagggcggcatcatcgagctggatatccgtcccgatgggcagatccgcgtcgacatg
ggtccgccgcgactggtgccgtccgagattccgttccaggccgaccaggaagccctgagc
tatccgctcgaagtcgatggccagcgcgtcgagttggccgccgtgtccatgggcaacccc
catgcggtgctgcgcgtcgacagcgtcgagcaggcacctgtgcatgaactcggaccgaag
atcgaacatcacccgcgctttgcgcagcgggtcaatgtcggcttcctgcaggtcgtcgat
cgccgccatgcgcggctgcgcgtgtgggaacgcggcgccggggaaacccaggcctgcggt
accggcgcctgcgcggctgcggtcgcggcaatacgccagggctggatggattcgccggta
cagatcgagctgccgggtggccgcctgtccatcgaatgggcaggtcccgggcagccggtt
atgatgagcggccccgccgttcgtgtatttgaaggacaggttcgcctatga
DBGET
integrated database retrieval system