Stutzerimonas stutzeri CCUG 29243: A458_20415
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Entry
A458_20415 CDS
T02168
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Pathway
psc03420
Nucleotide excision repair
psc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A458_20415 (uvrD)
03430 Mismatch repair
A458_20415 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psc03400
]
A458_20415 (uvrD)
Enzymes [BR:
psc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A458_20415 (uvrD)
DNA repair and recombination proteins [BR:
psc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A458_20415 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A458_20415 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
DUF3553
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AFM35298
UniProt:
I4CYZ1
LinkDB
All DBs
Position
4393580..4395769
Genome browser
AA seq
729 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLHQVERASLHSIL
SVTFTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWQEAKLAQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPRNIQAGGDLFLATQLKIYEAYE
EACARAGVIDFSELLLRALDLWRDHPGLLDHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLHQFSQDFPDAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARGI
GEKTVEALRQLARDQGLSMWAALHQAVGTKAVSGRAASALNAFVELVDTLALKVEGMQLH
SMAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYSEEDDDVQSPLAAFLD
HASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLVITYAETRRLYGSETYNKISRFVREVPPALIQEVRLSNTVTRSFSG
KSMSGSSLFDGAGVPETPFSLGQRVRHSLFGEGTILNFEGSGAQARVQVNFEDEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctctcctcctgaattccctcaacgatgctcagcgccaggccgtg
gccgcgccgcttggccgccagctggtattggctggcgccggctcgggcaagacccgcgtt
ctggtgcaccgtatcgcgtggctgcaccaggtcgaacgcgcctcgctgcactcgatcctg
tcggtgaccttcaccaacaaggctgccgccgagatgcgccagcgcatcgagcagctgctg
cacgtgaacccgcagggcatgtgggtgggcacctttcacggcctggcccaccgcctgctg
cgcgcgcactggcaggaggccaagctggcgcagaacttccagatcctcgattccgacgac
cagcagcggctggtcaagcgggtgatccgcgaactcggcctcgacgagcaacgctggcca
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgaaggcctgcgtccgcgcaac
atccaggccggcggtgatctgttcctcgccacccagctgaagatctacgaagcctatgaa
gaggcctgcgcccgcgccggggtgatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgcgaccacccgggcctgctcgatcactaccagcggcgtttccgccacgtgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcggctgctggccaag
ggcggcgagagcctgatggtggtcggcgacgacgaccagtctatctacggctggcgcggc
gcgcggatcgagaacctgcaccagttcagccaggacttccccgacgccgaaaccatccgc
ctggagcagaactaccgctccaccgcctgcatcctcaaggccgccaacgcgctgatcgcc
aacaaccagggccgtctcggcaaggagctctggacttccggctgcgagggtgagccgatc
agcctgtacgccgcgttcaacgagcacgacgaagcgcgctacgtggtcgagagcatcgag
aaggccatccgcgacggcatgagccgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggcgctgctgcgcgagaagattccctaccgcatctacggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgatc
cagacccgcgacaacgacgcggcgctggaacgggtgatcaacgtgccggcgcgcggcatc
ggcgagaagaccgtcgaagcactgcgccagctggcgcgtgatcagggcctgtcgatgtgg
gcggcgctgcatcaggcggtcggtaccaaggcggtttccggccgcgctgccagcgcgctg
aacgcctttgtcgagctggtcgataccctggcgctgaaggtcgaaggcatgcagctgcac
agcatggcgcagctggtcatcgagcagtccgggctgcttgcctatcaccgcgacgaaaag
ggcgagaaagcccaggcgcgggtggaaaacctcgaggaactggtctccgccgcgcgcgcc
ttcgacagctacagcgaagaggacgacgacgtccagtcaccgctggcggcctttctcgac
cacgcctcgctggaggccggcgaacagcaggccggcgaccacgaggacagcgtgcagctg
atgaccctgcacagcgccaagggcctggagttcccgctggtgttcctggtcggcatggaa
gaaggcctgttcccgcacaagatgagcctggaggaatccggccgtctggaagaagaacgc
cgcctggcctacgtcggcatcacccgcgccatgcagcagctggtgatcacctacgccgaa
acgcgccggctgtacggcagcgagacctataacaagatctcgcgtttcgtccgcgaagtg
ccgccggcgctgatccaggaagtacgtctgagcaataccgtgacgcgctcgttcagcggc
aagagcatgagcggctcgtcgctgttcgacggcgccggcgtgccggaaacgccgttcagc
ctcggccagcgtgtacgccattcgctgttcggcgaaggcaccatcctcaacttcgaaggc
tccggcgcccaggcccgggtgcaggtgaatttcgaggatgagggcagcaaatggctgatg
ctcagttacgcaaaacttgaagccctgtag
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