Pseudoalteromonas sp. CF6-2: L3Q70_00050
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Entry
L3Q70_00050 CDS
T11185
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf00071
Fatty acid degradation
pscf00280
Valine, leucine and isoleucine degradation
pscf00310
Lysine degradation
pscf00362
Benzoate degradation
pscf00380
Tryptophan metabolism
pscf00410
beta-Alanine metabolism
pscf00640
Propanoate metabolism
pscf00650
Butanoate metabolism
pscf00907
Pinene, camphor and geraniol degradation
pscf00930
Caprolactam degradation
pscf01100
Metabolic pathways
pscf01110
Biosynthesis of secondary metabolites
pscf01120
Microbial metabolism in diverse environments
pscf01200
Carbon metabolism
pscf01212
Fatty acid metabolism
Module
pscf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
L3Q70_00050 (fadB)
00650 Butanoate metabolism
L3Q70_00050 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
L3Q70_00050 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
L3Q70_00050 (fadB)
00310 Lysine degradation
L3Q70_00050 (fadB)
00380 Tryptophan metabolism
L3Q70_00050 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
L3Q70_00050 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
L3Q70_00050 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L3Q70_00050 (fadB)
00930 Caprolactam degradation
L3Q70_00050 (fadB)
Enzymes [BR:
pscf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
L3Q70_00050 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
L3Q70_00050 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
L3Q70_00050 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
L3Q70_00050 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UJX25594
LinkDB
All DBs
Position
complement(11347..13506)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVAFIKDNIAEFKFCADGSVNKLSQQTLQDCALALKELATNSDIKGMVFTSD
KDHFIIGADIFEFLPTFTKPQEELVAWIKNATDVFDAIEDLPFPTLSAVNGMALGGGCEW
ALATDYRVASSNAKIGLPEVKLGIMPGFGGTVRLPRLIGADNAMTWITTGKENRAADALK
VGAFDAVVSADKLLESSITTLEQAIAGKLDWQVKRQVKLQPLKMNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVKTIKAAANCERAEAMAIENANFAKLAATSEAAAQTGIFLADQYIK
GKAKKQAKHSELEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDINQDALDLGMGEASKL
LGKKVQRGHMAMDKMVATLGKIKPTLNDADLQSADIVVEAVVENPKVKQAVLAGLEKDLP
VGTILTSNTSTIRIDELASALEKPENFCGMHFFNPVPKMPLVEIIRGEKTSEATINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGADFTKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMARQDKDPVTVFANEKRFGQKNGAGFYQYAPDRRGR
LKKAKDATATELLSAITDAPKDFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALI
YGIGFPPFRGGAFRYLDQTGLANFVATADKYAHLGAIYQVSDETRKWAEEGRIFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcatttgaagttgctttcatcaaggacaacatcgccgagttt
aagttctgtgcagacggctcagtaaataaactttcgcagcaaaccttgcaagattgcgct
ttagcattaaaagaattggcaacaaactcagatatcaaaggcatggtgttcaccagcgat
aaagatcatttcattatcggtgccgacattttcgaatttttacctactttcactaaaccg
caagaagaattggttgcatggatcaaaaatgcaactgacgtttttgacgcgattgaagat
ttacctttcccaacgctaagtgctgtaaacggcatggcgcttggcggagggtgtgagtgg
gcacttgctaccgattatcgcgttgctagctctaacgctaaaattggcctacctgaagtt
aaactaggcattatgcctggttttggtggcacagttcgccttccacgccttattggcgct
gataatgcgatgacatggatcactacaggtaaagaaaaccgcgctgctgatgccctaaaa
gtaggagcatttgacgcggtagttagtgctgacaaacttttagagtcaagtattacaaca
cttgagcaagcaattgctggcaagctagattggcaagtaaaacgacaagtaaaattacag
ccactgaaaatgaaccgtgttgagcaaggtatgagctttgcgatggctgaaggcatggta
atgggtaaaacgaaaggtcactacccagcacctgttatggctgtaaaaacaatcaaagct
gcagcaaactgtgaacgcgctgaagcaatggcaattgaaaacgctaactttgctaaactt
gcagcaacaagtgaagctgccgcgcaaacaggtattttcttagctgaccaatacattaaa
ggtaaagcgaagaagcaagctaaacacagtgaacttgagatcaaacaagccgcagtatta
ggtgcaggtattatgggcggtggtattgcttaccaatcggcttataaaggcacgcctatt
atcatgaaagacatcaaccaagatgcacttgatttaggtatgggtgaagcatctaagcta
ctaggtaagaaagtacaacgtggccatatggcgatggataagatggttgccactttaggc
aagatcaaaccaacgctaaacgatgcagacctacaaagcgctgacattgttgttgaagcc
gtggttgaaaaccctaaagtgaagcaagccgttcttgcgggtcttgaaaaagacttacca
gtaggcactatcctaacttcaaatacctcaacaattcgtattgacgagttagcgtctgca
cttgagaaaccagaaaacttctgtggtatgcacttctttaacccagtgccaaaaatgcca
ctagtagaaatcattcgtggtgaaaaaacatcagaagcaacaattaatgcggttgttgat
tacgcattaaaactgggcaaatcaccaatcgttgtaaacgactgccctggcttctttgta
aaccgcgtactattcccttactttgcaggtttcagcaaacttgttgttgaaggtgctgac
ttcacgaaagttgataaagtaatggaaaatgtatttggttggccaatgggtcctgcgtac
cttcttgatgtggtaggtattgatacagcttaccactgtactggtgtaatggctgacggt
ttccctgagcgtatggctcgccaagataaagaccctgttactgtatttgcaaacgaaaaa
cgctttggccagaaaaatggtgctggtttctaccaatatgcaccagaccgtcgtggtcgc
ttgaaaaaagctaaagatgcaacagcaactgagctactaagtgctatcactgatgcaccg
aaagatttcgataaacaagaaatcattgaccgttgtatgatcccgatgatcaacgaagtt
ctactttgtttacaagaaggtatcgtagcgtctccacaagaagctgacatggcgctaatt
tacggcattggtttccctccatttagaggcggtgcattccgttacttagatcaaactggt
ttagcgaactttgttgcaacagcagacaagtacgctcacttaggtgcgatttaccaagta
tcagatgaaactcgcaagtgggccgaagaaggccgtatattctataaggtggaaggataa
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