Pseudoalteromonas sp. CF6-2: L3Q70_01170
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Entry
L3Q70_01170 CDS
T11185
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3Q70_01170 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pscf03019
]
L3Q70_01170 (groL)
03110 Chaperones and folding catalysts [BR:
pscf03110
]
L3Q70_01170 (groL)
03029 Mitochondrial biogenesis [BR:
pscf03029
]
L3Q70_01170 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pscf04147
]
L3Q70_01170 (groL)
Enzymes [BR:
pscf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L3Q70_01170 (groL)
Messenger RNA biogenesis [BR:
pscf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L3Q70_01170 (groL)
Chaperones and folding catalysts [BR:
pscf03110
]
Heat shock proteins
HSP60 / Chaperonin
L3Q70_01170 (groL)
Mitochondrial biogenesis [BR:
pscf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L3Q70_01170 (groL)
Exosome [BR:
pscf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L3Q70_01170 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L3Q70_01170 (groL)
Exosomal proteins of breast cancer cells
L3Q70_01170 (groL)
Exosomal proteins of colorectal cancer cells
L3Q70_01170 (groL)
Exosomal proteins of bladder cancer cells
L3Q70_01170 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Nal1_C
Motif
Other DBs
NCBI-ProteinID:
UJX25797
LinkDB
All DBs
Position
complement(238195..239841)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVLFAGDARGKMLTGVNILANAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDKEIGDIIAQAMEKVGRDSGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPYILLVDKKVSNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATIEDLGTAKRVVITKDDTTIIDGAGEEDGINGRVAQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRAASKLAELLGDNEDQSHGIKVALRAMEAPLRQIVTNAGDEASVVVNSVKGGEGNYGYN
AASGEYNDMIEMGILDPTKVTRSALQYAASIAGLMITTEAMVAEIPKDEPAAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtactttttgcaggtgacgcacgtggcaaaatgctaactggcgta
aatattttagcaaacgcagtgaaagtaactttaggtcctaaaggccgtaacgttgtatta
gataaatcattcggcgcgccagtcatcaccaaagatggtgtatctgtcgctaaagagatc
gagcttgaagacaagttcgaaaacatgggcgcacaaatggttaaagaagtagcgtctaaa
gcgaatgacgcagcaggtgacggtacaacaactgcaacagtattagcgcaagctatcgta
aacgaaggcttaaaagcggttgcagcgggtatgaaccctatggaccttaagcgcggtatc
gacaaagcggtcattgcagcagttgaagagcttaaagcgctttctgttccatgtgctgat
acaaaagcgattgcacaagtaggtactatttcagctaactctgataaagaaatcggtgac
atcattgcacaagcaatggaaaaagtgggccgtgattcaggcgttatcactgttgaagaa
ggtcagtcgttagaaaacgaattagacgtagtggaaggtatgcagtttgaccgtggttac
ctatctccttacttcatcaacaacgctgaaaaaggtgcagtagagctagacaacccttac
attctacttgtagacaaaaaagtatctaacattcgtgagctactacctacattagaagcg
gttgctaaagcaagtaagccattacttatcattgctgaagacctagaaggtgaagcactt
gcaacacttgttgtaaataacatgcgcggtatcgttaaagtgtctgcggttaaagcacca
ggttttggcgaccgtcgtaaagcaatgctacaagacatcgcagtattaaccggcggtact
gtcatttctgaagaaatcggtttagagcttgaaaaagcaactatcgaagacctaggtaca
gcgaagcgcgttgtgatcactaaagatgacacaacgatcatcgacggtgcaggtgaagaa
gacggcatcaatggtcgtgttgcacaaatcaaagcacaaatcgaagaagcgacgtctgac
tacgataaagagaaactacaagagcgtatggctaaactagctggcggtgttgcagtaatc
aaagttggcgcagcgactgaaatcgaaatgaaagagaagaaagaccgtgttgaagatgca
ctacacgcaactcgcgcagcggttgaagaaggtgtagtaccgggtggtggtgttgcatta
gtacgtgcagcaagcaaacttgctgaactacttggtgacaatgaagaccaaagccacggt
attaaagttgcactacgtgcgatggaagcaccacttcgtcaaatcgtgactaacgcaggt
gacgaagcatcagttgtcgttaactctgtaaaaggtggtgaaggtaactacggttacaat
gcagcatctggtgagtacaacgacatgattgaaatgggtatcttagacccaactaaagta
acgcgttctgcactacagtacgcagcttcaatcgcgggtcttatgatcacaactgaagca
atggttgctgagatcccgaaagatgagccagctgctccagatatgggcggcatgggcggc
atgggtggtatgggcggcatgatgtga
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