Pseudoalteromonas sp. CF6-2: L3Q70_03670
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Entry
L3Q70_03670 CDS
T11185
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L3Q70_03670 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_03670 (xseB)
Enzymes [BR:
pscf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
L3Q70_03670 (xseB)
DNA repair and recombination proteins [BR:
pscf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
L3Q70_03670 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SPESP1
Motif
Other DBs
NCBI-ProteinID:
UJX26269
LinkDB
All DBs
Position
complement(786485..786727)
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AA seq
80 aa
AA seq
DB search
MAAKKPENLSFEEALDELSNIVVQMEQGDLSLEQSLKQFERGIALANASSGKLQQAEQKV
AILMGNDSQAPLSNFDSNLD
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaagaaaccagaaaacttgagctttgaagaagccttggatgaattatctaat
attgttgtacaaatggaacagggtgacttgtcattagagcaatctcttaagcagtttgaa
cgtggtattgcattagctaatgcctcatcaggtaaactacaacaagcagaacaaaaagtt
gccatacttatgggtaacgatagccaagctccactgagcaatttcgattcaaatttggac
taa
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