Pseudoalteromonas sp. CF6-2: L3Q70_04150
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Entry
L3Q70_04150 CDS
T11185
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf02020
Two-component system
pscf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L3Q70_04150
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3Q70_04150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pscf03021
]
L3Q70_04150
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pscf02035
]
L3Q70_04150
Transcription machinery [BR:
pscf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3Q70_04150
Bacterial motility proteins [BR:
pscf02035
]
Flagellar system
Flagellar assembly proteins
Stator
L3Q70_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UJX26360
LinkDB
All DBs
Position
885964..886686
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AA seq
240 aa
AA seq
DB search
MLVEQQWPSSDEQQAGLMSTHTEGELLERYAYLVKRAASHMRTQLGVVVDMDDIQQIGLV
ALLSSIRRYGRNVDEQFSAFAFKRIRGAMLDEFRRIDWRGRQLRQQSHQLRDASRKLLKQ
LGREPNDSELCQALDIDLDQLLKLHYASQAEAIDSLEALLGHDDSFTDAGSQLSHTETAL
MLQKALASLPERNKLLLHLYYSHEMNMKEIALALDLTEARVCQLHKLAIESLTRKLQQSE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgaacaacaatggccatcttcggatgagcagcaagcaggtttaatgagtaca
cataccgagggggaactactcgaacggtatgcatacttagtgaagcgtgcagcttcccac
atgcgaacgcaattgggtgttgttgtcgacatggacgatattcagcaaataggtttagtg
gcactgctttcgtcaattcgtcgttatggtcgaaatgtcgacgaacaattttcggcattt
gcttttaagcgtattcggggcgcgatgctagatgagtttcgtcgaatagattggcgagga
cgacaactaagacaacagtcgcatcaattgcgtgatgcttcgcgcaagttattgaagcaa
ctaggcagagagccaaatgatagtgagctatgtcaagcattggatattgatttagaccag
ctgttgaaactgcattatgcaagtcaagctgaagcaattgatagcctcgaagcattgctc
ggtcacgatgattcgtttactgatgcaggcagccagttatcacatacagaaacggcttta
atgctacaaaaagcactcgccagcctaccagaaagaaacaagttgttactgcatctttac
tacagccatgaaatgaacatgaaagaaatagcccttgcccttgatttaaccgaagcacgg
gtctgccaactacataaattggcaatagaatctttaacaagaaaacttcaacaaagtgaa
taa
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