Pseudoalteromonas sp. CF6-2: L3Q70_05210
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Entry
L3Q70_05210 CDS
T11185
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_05210
Enzymes [BR:
pscf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L3Q70_05210
DNA repair and recombination proteins [BR:
pscf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L3Q70_05210
Prokaryotic type
L3Q70_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF2853
Motif
Other DBs
NCBI-ProteinID:
UJX26560
LinkDB
All DBs
Position
complement(1133443..1134939)
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AA seq
498 aa
AA seq
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MLNAVKQAINIVWFKRDLRLSDHQPLAEAAASSNPCLLLFNFEPLLLNDPHYSHRHWRFV
YQSLCDLNAQLKKQDAEIAIYNQDMLSVFESLEKEFDIRAVFSHQEIGLKNTFERDKAIK
NWLFTKSIPWHETPLGAVIRARPKQFDWQAHWHSVMNQPLVTPDWHNFKAVLPENYQVAK
YTECLSEQDEQFQYGGPHAARACLQSFIEQRAKGYQSGISSPSKSRETCSRLSPYLAWGN
LSLRQVYQTLKYYFTRQPLSWRRSLHAFESRLHWHCHFMQKFESQCSMEFLPQNPAYLHY
PYRDDELITEHLKRFEQGQTGIPIIDACMRCLAATGYINFRMRAMLVSFMTHHMNIHWHP
VSLILSRYFLDFEPGIHYPQIQMQASVTGTNTIRLYNPIKQSEDKDAEGMFIKTWCPELK
DLPIEDLHQPWLQPPMEALFNDFKLGEDYPEPMVDLEQAAKQARDRLWSFRERDDVKQGT
KVVLQKHVKSLKRQRHGS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgcagtaaaacaagcaatcaatattgtttggttcaaacgagatttgcgactt
tcagatcatcagcctctggcagaagctgctgcttcatctaatccgtgtctgttattattt
aatttcgaacctttattactaaatgaccctcattacagtcatcgtcattggcgatttgtt
tatcaatcgctttgtgacctaaatgcacagttaaaaaaacaagatgctgaaattgcgatt
tataatcaagatatgctctctgtgtttgaatcgctagaaaaagagtttgatattagagcc
gtttttagccaccaagaaatcggccttaaaaataccttcgagcgtgataaagcaataaaa
aattggcttttcactaaatctattccatggcatgaaaccccgcttggtgctgttataaga
gcgcggccaaagcaatttgattggcaagctcattggcacagcgtgatgaatcaaccgctt
gtaacgccagattggcataactttaaagccgttctacctgaaaattatcaagttgctaaa
tacactgagtgcttatcagagcaggatgaacagtttcaatatggcggccctcatgctgcc
agagcctgtttacaaagctttattgaacagcgtgctaagggctatcaaagcggtatctca
agcccatcaaaaagtagagagacttgctctcggctttcaccctatttagcttggggaaac
ctaagccttcggcaagtttatcaaaccctaaagtactatttcacaaggcagcccctaagc
tggcgtcgctcattacatgcgtttgaatcaagattgcattggcattgccactttatgcaa
aagtttgaaagccagtgcagtatggagtttctacctcaaaaccctgcttacctgcattat
ccttatcgagatgatgaacttattacagagcacttaaaacgctttgaacaaggtcaaact
ggtatccctattatcgatgcatgtatgcgctgcttggcagcaactggctatataaacttt
cgaatgcgtgccatgttagtgagttttatgacccatcatatgaacattcattggcaccct
gtcagtttaattctatcgcgttattttttagactttgaacctggaattcattacccacaa
atccaaatgcaggcgtcagttacagggaccaacaccattcgcttatataatccaataaag
caatctgaagacaaagacgcagaggggatgtttattaaaacctggtgtcctgaacttaaa
gacttacccatagaagatcttcatcagccatggctacaaccaccgatggaagccctcttt
aatgactttaaactcggcgaagactacccagagcccatggtcgatttagagcaagcagca
aaacaagctcgggaccgattatggtcttttagagaacgcgatgatgtgaaacagggtaca
aaagttgtgcttcaaaaacatgttaaaagtcttaaaaggcaacgccatggctcataa
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