Pseudoalteromonas sp. CF6-2: L3Q70_05620
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Entry
L3Q70_05620 CDS
T11185
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf02024
Quorum sensing
pscf03060
Protein export
pscf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
L3Q70_05620 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
L3Q70_05620 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3Q70_05620 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pscf02044
]
L3Q70_05620 (ffh)
Enzymes [BR:
pscf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
L3Q70_05620 (ffh)
Secretion system [BR:
pscf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
L3Q70_05620 (ffh)
Eukaryotic Sec-SRP protein
L3Q70_05620 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
cobW
AAA_33
YqeC
KTI12
ATP_bind_1
AAA_31
APS_kinase
ABC_tran
AAA_24
FliD_C
TsaE
AAA_16
AAA_14
AAA_30
Helicase_RecD
Thymidylate_kin
PRP9_N
PhoD
Motif
Other DBs
NCBI-ProteinID:
UJX26638
LinkDB
All DBs
Position
1228548..1229924
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVREFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELSLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLADEVGVEFFPSDISQKPVDIANNAISHAK
KKFIDVVLVDTAGRLHVDNDMMDEIKALHSAINPIETLFVVDAMTGQDAANTAKAFDEAL
PLSGVILTKTDGDARGGAALSIRHITGKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEKAAKVAEKVFKGDGFTLDDFAEQLRQMKNMGGMMSMLDKLPGMQNL
PDAVKGQMGDKTFVQMEAIINSMTAKERARPEIIKGSRKKRIAAGSGTQVQEINKLLKQF
TQMQKMMKKMKGKGGMKKMMRGMKGMLPPGMMGGGPKF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctccaagaacgcttaggtaaaaccttaaaaaatatcagtggtcgtgga
cgcctaactgaagacaatattaaagatacattacgtgaagtccgcatggcatttttggaa
gcggatgttgcactgcctgttgttcgtgagtttgttaagcaagttaaagaacgtgcagtg
ggtgttgaagtcactaaaagcttaagccctggccaagtttttatcaaaattgtccgcgaa
gagcttgaaaaagccatgggcgaagcgaatgaagagcttagccttaatgcgcagccgcca
gctgttgtaatgatggcaggcctgcaaggtgcgggtaaaacgacgagtgtcggtaaacta
gctaaatttttaaaagagcgtaaaaagaaatcggtacttgttgtgagtgctgacgtttat
cgtccagcggcaattaaacagcttgaaacacttgcagatgaagtgggcgttgagttcttc
ccgagtgatatttcgcaaaagccggttgatatcgcaaataatgctatctctcatgcgaag
aagaaatttatcgatgtcgtgttagtcgataccgcgggtcgtttgcatgttgataacgac
atgatggatgaaatcaaagcacttcatagcgcgattaacccaatcgaaactttatttgtt
gttgatgcaatgacaggtcaagatgctgcaaatacagcaaaagcatttgacgaagcgctt
cctttaagtggtgtgatcttaacgaaaacggatggtgatgctcgtggtggtgctgcacta
tcaattcgtcatatcacgggtaagccaattaagttcatgggtgtgggtgagcgtaccgat
gcacttgaaccattccaccctgaccgtattgcttctcgtatcctaggtatgggtgatgta
ctttcattaatcgaagaagtcgaaatgaaagttgataaagagaaagcggctaaagttgca
gagaaagtctttaaaggtgatggatttacacttgatgactttgcagagcagcttcgtcag
atgaaaaacatgggcggtatgatgtcaatgctcgataaattgccgggtatgcaaaactta
cctgatgcagttaaggggcaaatgggtgataaaacgtttgtacaaatggaagcgattatt
aactcaatgactgcaaaagagcgtgcgcgccctgaaatcatcaaaggctctcgtaaaaaa
cgtattgcagcaggctctggtacacaggtgcaagaaatcaataaattgcttaagcaattt
acgcagatgcaaaaaatgatgaagaaaatgaaaggtaaaggcggcatgaagaaaatgatg
cgtggcatgaaaggcatgttaccgccaggtatgatgggcggaggccctaagttttaa
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