Pseudoalteromonas sp. CF6-2: L3Q70_06180
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Entry
L3Q70_06180 CDS
T11185
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pscf03016
]
L3Q70_06180 (miaB)
Enzymes [BR:
pscf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
L3Q70_06180 (miaB)
Transfer RNA biogenesis [BR:
pscf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
L3Q70_06180 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
GETHR
Motif
Other DBs
NCBI-ProteinID:
UJX26743
LinkDB
All DBs
Position
complement(1344050..1345495)
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AA seq
481 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSQKMADLLDATNGYQLTEEAEDADVILLNTCSIREKAQEKVF
HQLGRWKLLKDDKPELIIGVGGCVASQEGDSIRQRAPFVDVIFGPQTLHRLPEMIKQVQS
GDSSSVVDVSFPEIEKFDRLPEPKAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPLD
DVLLEVAQLAEQGVREVNLLGQNVNAYRGETHDGEICYFSDLLRYVAAIDGIDRIRYTTS
HPVEFTPDIIDAYADVPELVDHLHLPVQSGSDRILNLMKRGHTALEYKSTIRKLRKIRPN
LSMSSDFIIGFPGESKADFEATMNLINDIGFDMSFSFIYSARPGTPAADLPDDVSEQEKK
ERLYLLQNRITQMAQQISRQMFDTEQRILVEGPSKKNPMELRGRTENNRVVNFEGPHSVI
GQFVDVRITEALPNSLRGELIRTESEMNLRRDVAPSSILSKAAEAEAAQAPNEIGVATFV
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagctgcatattaaaacctggggttgtcagatgaacgagtacgactctcag
aagatggctgatctactagatgcgactaacggctatcagttaactgaagaagctgaagat
gctgacgtgatcttactcaatacctgttcaatccgtgaaaaagcacaagaaaaagtattc
catcagcttggccgttggaaactattaaaagatgataagcctgaattaatcattggtgtt
ggtggctgtgttgcatcgcaagagggtgattcaattcgtcaacgtgcgccgtttgttgat
gtaatatttggcccgcaaacattacaccgcttaccagaaatgattaagcaagtacaaagt
ggcgacagcagctcggtagttgatgtttcattccctgagattgagaagtttgaccgccta
cctgaaccaaaagcggaaggccctactgcgtttgtatctattatggaaggttgttctaaa
tactgtacattctgcgtagtaccttatacgcgaggtgaagaagtaagccgtccacttgat
gacgtattacttgaagttgcacaacttgcagagcaaggtgttcgcgaagtgaacctactt
ggtcaaaacgtaaatgcctatcgcggtgaaactcacgacggtgaaatttgttacttctct
gatctattacgttatgtggcagcgattgacggtattgaccgtattcgttacaccacttca
caccctgtagaatttacgccagatatcattgacgcctatgctgatgtacctgaacttgtt
gatcacctgcacttaccagtgcaaagtggttcagaccgtattttaaaccttatgaaacgt
ggccatactgcactcgagtacaaatcaacgattcgtaagttacgtaaaattcgccctaat
ctaagtatgtcatcagatttcatcattggtttcccaggcgaaagtaaagctgactttgaa
gcaaccatgaaccttatcaatgatatcggttttgatatgagctttagctttatctacagt
gctcgccctggtacgcctgctgctgatttaccagatgatgtatcagagcaagagaaaaaa
gaacgtttatacctgttacaaaatcgtattacgcaaatggcgcagcaaatcagccgccaa
atgtttgataccgaacaacgtattttagttgaaggtccttctaagaagaacccaatggaa
ttacgtggccgtacagaaaacaaccgagttgtaaattttgaaggcccacactctgtgatc
ggtcaattcgttgatgtacgtattactgaagcattgccaaattctttacgtggtgaatta
attcgtacagaatcagagatgaacttacgccgtgacgtggcgccatcatctattttaagt
aaggcagccgaggctgaagctgcacaagcccctaacgaaattggcgttgctactttcgtc
ccgtag
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