Pseudoalteromonas sp. CF6-2: L3Q70_06360
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Entry
L3Q70_06360 CDS
T11185
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pscf01011
]
L3Q70_06360
Enzymes [BR:
pscf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
L3Q70_06360
Peptidoglycan biosynthesis and degradation proteins [BR:
pscf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
L3Q70_06360
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_OapA
LysM3_NFP
LysM_RLK
LysM2_CERK1_LYK3_4_5
DUF3071
DUF6884
SLAM
Motif
Other DBs
NCBI-ProteinID:
UJX26768
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Position
complement(1373405..1374991)
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AA seq
528 aa
AA seq
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MYRSPLVFTLALALSGCQLTTSDTAQPNIANNDVEQQLGGASPSDVNDALMINAQYQQLT
DIDAPPPVFDDVWERIRYQLSIDVPQNRPVVAERNYYARHQAYLDRIAKRAEPYLYFIVE
EVEKREMPIEIALLPIVESAFDPFGYSHRSASGIWQFMPQTGERFDLKQNWWYDGRRDIV
QSTRAALDYLSYLHKTLEGDWLNAIAAYNSGEGRLLRAIKKNRKKHLPTDFWSLDLPRET
TSYVPKLLALSDLVKRSDEFGVKWQPIINAQVVEAVNIGSQIDLALAADMADISLTELYR
LNPGFNRWATDPNGPHFLLLPSDKVESFTEKLAKTEQKDRLRWQQYVVARGDSLSVIAKK
FSTSASAIKTLNKLSSNTIRVGQQLLVPLSDGEINSQHLPKSVRMAANKATRKKLSHKVA
SGDTLWDISREYDVTIAELATWNKLKKDAVLRVGQKLTVYKQEKSQLATTQIKERTITYK
VRRGDSLARIAAKFNVSVEDIVKWNSLAGQKYIQPGQKLKLKVDVRSA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatctcctctagtttttacactcgcgctggctttaagtggttgtcaactaaca
acttctgatactgcacaacctaacattgctaataatgatgttgagcagcaactgggtggt
gccagtccaagtgatgtcaatgatgcattgatgatcaacgcacaataccaacagttaact
gatattgatgcaccaccaccagtttttgacgatgtatgggaacgtattcgttatcagcta
tctattgatgtgccacaaaaccgtcctgtagttgctgagcgtaattactatgcacgtcat
caagcataccttgaccgcattgcaaaacgcgcagagccatacctttacttcattgtggaa
gaagttgaaaagcgtgaaatgccaattgagatagcgcttttacccattgttgagagtgcc
tttgacccctttggctattcacaccgcagtgcctctggtatctggcaatttatgccacaa
accggtgagcgtttcgatttaaaacaaaactggtggtacgacggtcgtcgtgacattgtg
caatcgacgcgtgcagcgcttgattacttatcatatttacacaagaccttagaaggtgat
tggttaaatgccattgccgcctataactcaggtgaaggtcgtttacttcgtgctattaaa
aagaaccgcaaaaaacacttacccacagatttttggtcattagacctgccacgagaaacc
acgtcgtatgtaccaaagctcttggctctgtctgatcttgtaaagcgcagtgacgaattt
ggtgtgaagtggcaaccaatcatcaacgcgcaagtagttgaagccgttaatatcggtagc
caaattgatttagcacttgccgctgatatggctgatattagcttaactgagctgtaccgc
ttaaacccaggctttaatcgctgggcgacggatccaaacggtccacactttttattactg
ccatcagataaagttgagtcttttactgagaaactagcaaaaacagagcaaaaagatcgc
ctacgttggcagcaatatgtggttgcccgtggtgatagtttatcagtgatagcgaaaaag
ttttcaacgagcgcaagcgcgataaaaacgctgaataaactttcatcaaatactattcgt
gttggccagcagttacttgtgccactcagtgacggtgaaatcaatagtcagcacttacct
aagtctgtgcgaatggctgcgaataaagcgacacgtaaaaaacttagccataaagtcgcc
agtggcgataccttatgggatatcagccgcgagtacgatgtgaccattgcagagcttgca
acatggaataaactgaaaaaagacgctgtattgcgtgttggtcaaaagctcactgtgtat
aaacaggaaaaatcacaacttgctactacacaaatcaaagagcgcaccattacctataaa
gtgcgtcgcggtgattcgttagcacgcattgctgccaagtttaatgtgtctgtagaagat
attgttaaatggaactcattagcagggcaaaaatacattcaacctgggcaaaagcttaaa
ctcaaggttgatgtacgaagcgcttaa
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