Pseudoalteromonas sp. CF6-2: L3Q70_08005
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Entry
L3Q70_08005 CDS
T11185
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscf03032
]
L3Q70_08005 (gyrA)
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_08005 (gyrA)
Enzymes [BR:
pscf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L3Q70_08005 (gyrA)
DNA replication proteins [BR:
pscf03032
]
Prokaryotic type
DNA Topoisomerases
L3Q70_08005 (gyrA)
DNA repair and recombination proteins [BR:
pscf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3Q70_08005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UJX27060
LinkDB
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Position
1733576..1736272
Genome browser
AA seq
898 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLALIQNPDMTIADLIEYIPGPDFPTAAIINGKKGIEQAYLTGRGKV
YIRARAEIEVDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALDNNQPKCFNLKEMLEAFIVHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARSWELGTV
KAMLEKAGEDNVARPDWLADDLGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILDEYQ
TLLDLIAELLFILSSPERLMEVIRDELVEIKEQYGDERRTEISAAAHDISLEDLINEEDV
VVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVREYEEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEAEESAVVDENG
NAVLDENGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKSDGAILTVTENGYGK
RTALEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVDELEAIEGEAVEVVDTNPEETGDNPPSE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagatgaattaaaaaattcc
taccttgattacgcgatgagtgtaatcgtagggcgtgcattgccagacgtacgtgacggc
ttaaagcctgttcaccgccgtgttttattcgcaatgaacgaactcaataatgattggaat
aaaccttacaagaaatcagcacgtgttgttggtgatgtaatcggtaagtaccacccacat
ggcgacagcgcggtatatgacaccatcgttcgtatggcgcagcctttctcattacgctat
atgctagttgacggccaaggtaactttggttctgttgatggtgactctgcggcagcaatg
cgttatacggaagtccgtatggcgaaaatgtcacatgaattattagctgacttagaaaaa
gaaacggttgattacgtacctaactacgatggtactgagcaaattcctgacgtattacct
actaaagtacctaacttattagtaaacggttcttcgggtatcgcggttggtatggcgaca
aacattccacctcataacttaacagaagttatcaatggttgtttagcgcttattcaaaac
cctgatatgacaattgctgaccttattgaatatatcccaggtccagatttcccgactgcg
gcgattatcaatggtaaaaaaggtattgagcaagcgtacctaacgggccgtggtaaagtt
tatattcgtgctcgcgctgaaatcgaagtagacgaaaaaactggccgtgagacgatcatc
gtccacgaaatcccttatcaagttaacaaagcgcgtcttatcgaaaagatcgctgagctt
gttaaagataagaagattgaaggtattagcgcactacgtgatgaatcagataaagacggt
atgcgcatcgttatcgaaatcaaacgtggtgatgttggtgaagtaatcttaaacaacctt
tatgcacaaactcagttacaaactgtgtttggtatgaacatggttgcactagataacaac
caacctaagtgctttaaccttaaagaaatgcttgaagcgtttatcgtacaccgccgtgaa
gttgttacacgtcgtacggtatttgatttacgtaaagcccgtgaccgtgctcacacgctt
gaaggcttagcgattgctcttgcgaatatcgatccgattattgaacttattcgtaagtca
ccaacaccagcagaagcaaaagcagcattaacagcacgctcatgggagctgggtactgtt
aaagcaatgcttgaaaaagcaggtgaagataacgttgcacgtcctgattggttagctgat
gatttaggtatccgtgacggtcaatactatttatctgagcaacaagcacaagcaattcta
gacctacgtttacacaagctaacgggtcttgagcatgaaaagattttagatgagtaccaa
acactccttgatcttattgctgagcttttatttatactttcaagcccagagcgcctaatg
gaagttatccgcgacgagctagtagaaattaaagagcaatatggtgacgaacgtcgtact
gaaatcagtgcagcagctcacgatatcagccttgaagacctaattaatgaagaagacgtt
gttgtaacgctttctcacgaaggttacgttaagtatcaaccattatctgactacgaagca
cagcgtcgtggtggtaaaggtaagtcagcaacgaagatgaaagatgaagatttcatcgaa
cgtctattagttgccaatacacacgatacaatcctgtgtttctcaacggcaggtcgcttg
tattggcttaaagtatatcagttaccacttgcaagccgtgcggcgcgcggtaagccaatt
gttaacttattaccacttgaagctgatgaacgtattactgctatcttaccggtacgtgag
tacgaagaagataaatacatcttcatggcgactgcgtttggtacagttaagaaaacacca
ctgactgcgtatagccgtcaacgtgccagcggtatcatcgctgtgaacctaaatgaaggc
gatagcctaattggtgttgatatcactgatggcacgaatgaaatcatgctattcactgat
gcgggtaaagttgttcgctttaaagaagcggaagaatcagctgtcgttgatgaaaacggc
aatgcagttctagacgaaaatggtaacccagaaatccgcttcaaaggtgtacgtccaatg
ggccgtacagcgacgggtgttcgtggtattaagatggcagacgatcaacgcgtggtgtca
ttaatcgtacctaagtcagatggtgcaatcctcactgtgactgaaaatggttacggtaag
cgtacggcacttgaagattacccatcgaagagccgtgcaacgcaaggtgttgtatcaatc
aaagtaagcgagcgtaatggcgctgtggttggtgcagtacaagttgatgacaacgacgaa
atcatgattatctctaatcgcggtacactcgtacgtactagggttaatgaggtttctaca
gttggtcgtaatacacagggcgttattttgatacgaactattgacgaagagcaagtagtt
ggtttacaacgtatcgaagaaatcgaagttgatgagcttgaagccatcgaaggcgaggcc
gttgaagtagtcgatacaaatcctgaagaaacgggtgataacccaccttcagaataa
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