Pseudoalteromonas sp. CF6-2: L3Q70_10240
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Entry
L3Q70_10240 CDS
T11185
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_10240
DNA repair and recombination proteins [BR:
pscf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
L3Q70_10240
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_22
AAA
AAA_16
ERCC3_RAD25_C
DZR
T1R_D3-like
SLFN-g3_helicase
Zn_Ribbon_1
Zn_ribbon_3
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UJX27201
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Position
complement(2209536..2211281)
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AA seq
581 aa
AA seq
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MKYTLRPYQQEAVDRTVAHFRKTNDAALIVLPTGAGKSLVIAELARIARQKILVLAHVKE
LVEQNAQKYASFGFKASIFSAGLKQKSLSEQVTFASVQSLARNTAQLDEAYSLLIIDECH
RVSGDDKSQYGQVISALKKQNSQLKVLGLTATPFRMGMGWVYHHHYHGFVRGEQSAPFKK
CIFELPLRYMIKHGYLTPPHEIDAAISHYDFASLPSDSFGRYSVENMNALLKDSTRATKA
IIKQVIDYSENRHGVMIFAATVMHAKEIVGYLPAEQTALITGETDNNERDQIITLFKQKQ
LKFLVNVSVLTTGFDAPHVDYIAILRPTESVSLYQQIVGRGLRLSEGKKDCLVIDYAGNG
FDLFYPEVGSKKGQSDNEPVQVLCPGCGFANIFWGKTDDSGKVIEHFGRRCQGLLDDGDT
QEQCDYRFRFKECEQCGEQNDIAARQCQSCGAMMADPDDKLREALNLKDALVLRCSGLSA
KALPNGLLKISYFDEDGASCDEIFNLANDTGRFIFNKQFQRHKEGAASKKWQTAEQVESA
QHLLVAPDFVIARKNKKYGWKVAEKLFDYEGSFRKANQLSH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacacactaagaccttatcagcaagaagccgtagatagaaccgttgcgcacttt
cgaaagacaaatgatgccgcgttgattgtgttgcccacaggagcgggtaaaagcttagtc
attgcggaacttgcaagaatagctaggcaaaaaattttagtgctcgcccatgttaaagag
ctggtggagcaaaatgcacaaaaatatgccagctttggttttaaggcgagtatcttctcg
gcaggtttaaagcaaaaatcactgagtgaacaagtgacctttgccagcgtccagtcactt
gctagaaataccgcacagcttgacgaagcctactcattgctaattattgatgagtgccac
cgtgtaagtggcgatgataaaagccaatatggacaggtgatcagtgccctgaaaaagcaa
aactcacaactcaaagtgttagggttgactgcgacaccatttagaatgggtatgggctgg
gtttatcatcatcattaccatggatttgttcgaggggagcaatcagcaccattcaaaaag
tgtatttttgaattaccactacgctacatgattaaacatggctatttaacacctcctcat
gaaattgatgctgcaattagtcattatgactttgcttcattacccagtgactcttttggt
cgctacagtgttgaaaacatgaatgcactgcttaaggacagtacccgggcaaccaaagcc
attattaaacaagtgattgattacagcgaaaatcgccatggagtgatgatttttgcagcc
actgttatgcatgcaaaagaaattgttggctatttacctgctgagcaaactgcgttgatt
acaggggagactgataacaacgaacgcgaccaaattattactctatttaaacaaaaacag
ttaaagtttttggtcaatgtttcggtgttaacaacagggtttgatgctcctcatgtcgac
tatattgctattttacgtcctacagaatcagtgagtctataccagcaaatagtgggtcgt
ggactgcgtttaagtgaagggaaaaaagattgcttagtcattgactatgcagggaatggt
tttgatctcttttacccagaagtaggcagtaaaaaggggcaaagtgataatgaaccagta
caggtactgtgtcctggttgcggttttgctaatattttttggggcaaaacagacgatagc
ggtaaagtgattgaacattttgggcgacgctgccaaggattacttgacgatggagacaca
caagaacaatgtgattatcgctttcgcttcaaagagtgtgagcaatgtggtgagcaaaat
gatattgctgctagacaatgtcagtcatgtggcgcaatgatggctgaccctgatgataaa
ctacgagaagcccttaatttaaaagatgccttagtgcttcgttgtagcgggttgtcagcg
aaggcattacctaatggacttttaaaaataagttactttgatgaagatggcgccagttgc
gatgagatttttaatctagcgaatgatacggggcgatttatttttaataaacagtttcag
cgacataaagagggagcagctagcaaaaagtggcaaactgctgaacaagttgaatcagca
cagcatttattagttgcccccgattttgttatagcgcgtaaaaataagaagtatggttgg
aaggtagctgagaaattgtttgattatgaaggcagcttcagaaaagcaaatcaattgtca
cattag
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