Pseudoalteromonas sp. CF6-2: L3Q70_11225
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Entry
L3Q70_11225 CDS
T11185
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3Q70_11225 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pscf03019
]
L3Q70_11225 (pnp)
03016 Transfer RNA biogenesis [BR:
pscf03016
]
L3Q70_11225 (pnp)
Enzymes [BR:
pscf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L3Q70_11225 (pnp)
Messenger RNA biogenesis [BR:
pscf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L3Q70_11225 (pnp)
Transfer RNA biogenesis [BR:
pscf03016
]
Prokaryotic type
tRNA degradation factors
L3Q70_11225 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
S1_2
KH_2
KH-I_KHDC4-BBP
aRib
KH_SLS1_2
KH_NusA_2nd
DUF3016
Motif
Other DBs
NCBI-ProteinID:
UJX24567
LinkDB
All DBs
Position
complement(2413631..2415763)
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AA seq
710 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKRDAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPDGFVNEVQVIATVVSVN
PEIQPDMVAMIGTSAALAISGIPFNGPIGASRVGFINGEYVLNPTLAELEESQLDLVVAG
TDNAVLMVESEAETLSEDVMLGAVVYGHEQSQAIINAINEFKAEAGKPAWDWTAPEKNIT
LAEKISAIAADKVGEAYRITDKVARKEALGVAKEEVVATLTANLAEGEELDTQEVGKLFG
SLEKEIVRGRIIAGEKRIDGREPDMVRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTNKNHFMLHYNFPPFCVGETGFVGSPKRREIGHGNLAKRGISAVLPTL
TDFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEGEDFVVL
SDILGDEDHLGDMDFKVAGTSNGITALQMDIKIEGITKEIMQIALKQAKAARLHILGVMD
EAISAPSEELSQFAPRIYTMQIPAKKIAEVIGKGGATIRQLTEETGTTIEIEDDGTIKIA
ATDGISANDAIKRIEQLTAELEVGTIYTGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVTDHLSEGQEVQVKVLEVDRQGRVRLSIKEAMEPAAEEKAEEPKDAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattattaaagaatttcaactaggtcaacatactgtgactctagaaacaggt
gctatagcacgtcaagctgacggcgcagtactagcaagcattggcgatacttcagtatta
gttactgtagttggtaagcgtgatgcacaaccaggtcaagacttcttcccactaacagtt
aactaccaagagcgtatgtacgctgcgggtcgtatccctggtggtttccttaagcgtgaa
ggtcgtcctaacgatggcgaaacgcttattgctcgtctaatcgaccgtccaatccgtcct
cttttccctgacggttttgtaaacgaagtacaagtaatcgcgacagttgtttctgttaac
ccagaaatccaacctgatatggttgctatgattggtacgtcagcagcacttgctatctct
ggtattccattcaatggtcctatcggtgcatcacgtgttggttttatcaacggtgaatac
gtacttaacccaacacttgctgaacttgaagaaagccaattagacctagttgttgctggt
actgataacgcagtacttatggttgaatcagaagctgaaacactatctgaagacgtcatg
ctaggtgcggttgtttatggtcatgagcaatctcaagctatcatcaacgcaatcaacgaa
ttcaaagcagaagcaggtaaacctgcttgggattggacagcaccagagaaaaacatcact
cttgctgagaaaatctctgcaatcgctgctgacaaagtaggtgaagcataccgcatcact
gacaaagtagcgcgtaaagaagcattaggtgtagcgaaagaagaagtagttgctacatta
actgctaaccttgctgaaggcgaagagctagatacgcaagaagttggcaagctattcggt
tctttagagaaagaaatcgttcgtggccgtatcatcgctggtgaaaaacgtatcgatggt
cgtgaaccagatatggttcgtgcactagacgtaatgacaggtgtgttaccgcgtactcac
ggttcagcaatcttcacccgtggtgagacacaagcacttgtgactgcaacattgggtaca
gagcgtgattcacagttaatcgacgatttaactggtactaacaaaaatcacttcatgctt
cactacaactttcctccgttctgcgtaggtgaaactggttttgtaggctcacctaagcgt
cgtgaaattggtcacggtaacctagctaagcgtggtatctcagcggtactacctacgctt
actgacttcccatactcaatccgtgttgtttcagaaatcactgaatcaaatggttcatcg
tctatggcatcagtatgtggtacgtcattagcgcttatgaatgccggtgtaccaattaaa
gcatctgttgctggtattgcgatgggtctagttaaagaaggcgaagatttcgttgttctt
tctgatatattaggtgatgaagatcacttaggtgacatggactttaaagtagcgggtact
tcaaacggtatcacagcactacaaatggatatcaaaattgaaggtatcactaaagaaatc
atgcaaatcgcgcttaaacaagcgaaagcagcacgtctacacatattaggtgttatggac
gaagcgatttcagctccttctgaagagttatctcagttcgcaccacgcatctacacaatg
caaattcctgcgaagaaaattgctgaagttattggtaagggtggcgcaactattcgtcaa
cttactgaagaaactggcacgacgattgaaatcgaagatgacggtacaatcaaaatcgct
gcaactgacggcataagcgcaaacgatgctatcaagcgtatcgagcaattaactgcagag
ctagaagtagggaccatctacacaggtaaagtggtacgtattgttgattttggtgcgttc
gttaatatccttccgggtaaagacggtctagtgcacatttcacaaatcagcacagagcgt
gttaacaacgtaactgatcacctaagcgaaggccaagaagtacaagtaaaagttcttgaa
gttgatcgccaaggtcgtgtacgtttaagcattaaagaagcgatggaaccagctgctgaa
gaaaaagcagaagagccaaaagacgctgaataa
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