Pseudoalteromonas sp. CF6-2: L3Q70_11235
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Entry
L3Q70_11235 CDS
T11185
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pscf03016
]
L3Q70_11235 (truB)
Enzymes [BR:
pscf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L3Q70_11235 (truB)
Transfer RNA biogenesis [BR:
pscf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3Q70_11235 (truB)
Prokaryotic type
L3Q70_11235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Shigella_OspC
Motif
Other DBs
NCBI-ProteinID:
UJX24569
LinkDB
All DBs
Position
complement(2416383..2417327)
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AA seq
314 aa
AA seq
DB search
MARRTKGRAIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETREVSVTPEQLAEQIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVFSLTLDEFDEANNEVQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSAVGHYPSEKMVTLEQLEEKLQQAKADDVAPSSYLDE
LLLPMDTALVDLPVIEITHEQGVAFSHGQTVVIGKPVPDGAVKVMADGVFIGTGERHKDG
HLKSKRGLSNQLPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgcactaaaggtcgtgctattgacggcattttattacttaataagccgcaa
ggtatttcatcaaacaaagcgttgcagcaagcaaagggaatttactttgctcaaaaagcg
ggccataccggtgcgcttgatccgctcgcgacggggatgctgcctatttgttttggtgaa
gcgactaagtttacccagtttttgctagataccgataaaacttatgtcgttcgtgccaag
ctaggtgagcgaactacaacgtctgattcagatggtgaagtggttgaaacgcgtgaagtc
tcggtaacacctgagcaattagctgagcaaattgccagtttcttaggtgagtcggatcaa
tatccttcgatgtactctgcgcttaaataccaaggtcagcctttgtataaatatgcccgc
gaaggcattgaagtgccgcgaaagtgtcgaaaaattaatgtatttagtttaacgcttgat
gagttcgatgaagcgaataacgaagtacaaatgacggcacatgtgtctaaaggcacttat
attcgtactattgttgacgacttaggtgaaaagcttggctgtggtgcgcatgtgatcatg
ttacatcgcagtgcagttggccattatccaagtgagaaaatggtcactcttgaacaactt
gaagaaaagttacaacaagcaaaagcagatgatgttgcgccttcaagctacctcgatgaa
ctcctactgccaatggatactgctttggttgacctacctgtgattgaaattacacacgag
cagggcgtggcatttagtcatggtcaaactgtagtgattggtaagcctgtaccagatggt
gcggtaaaagtaatggctgatggggtattcattggtaccggtgagcgccataaagatggt
cacttaaaatcaaagcgcggtttatcaaatcaactgcctgagtaa
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