Pseudoalteromonas sp. CF6-2: L3Q70_12930
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Entry
L3Q70_12930 CDS
T11185
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3Q70_12930 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pscf03019
]
L3Q70_12930 (pcnB)
Enzymes [BR:
pscf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
L3Q70_12930 (pcnB)
Messenger RNA biogenesis [BR:
pscf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L3Q70_12930 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UJX24883
LinkDB
All DBs
Position
2788151..2789440
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AA seq
429 aa
AA seq
DB search
MIERSEHGISRKQFSPNAIKVLYRLKEGGFDAYLVGGCIRDILLGQQPKDFDVVTNATPE
QIKRLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHEADEAKNQISQSSEHGQLLRDNV
YGSIEEDAERRDFSINALYYSINDFCIYDYANGISAIKAKQIELIGDPETRYREDPVRML
RAVRFATKLGMSIAPATEKPIAGLANLLDHIPAARLFEESLKLFLNGKAEENFIMLRQYG
LFRALFPALDKILDANPDGLEHAFILQMFKNTDKRINADKKVTPAFIFAALLWFPLQSIA
KKLQQRDQLSEYDAFAQAMNKVLSENAQHVAVPKRFTLGARDIWHIQQRLDKRGGQRAYR
LTQQPRFKAAYDFLLLRVQAGETELQELANWWTNYLGQDINGQKEMVKALGHQGGPKRRR
RPRKKKTEQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacgtagtgaacatgggatttcacgtaaacaatttagcccaaatgcaatcaaa
gtattgtaccgcttaaaagaaggtggctttgatgcttaccttgtaggtggttgtattcga
gatatattgttaggtcaacaaccaaaagactttgacgtagtaactaacgcaacacctgaa
cagatcaaaagactgtttcgaaattgcagactgataggtcgacgctttcgtttggcgcat
attgtatttggtcgtgagattatcgaagtagcgaccatgcgtggacaccacgaagccgac
gaagctaaaaatcaaattagtcaatcaagcgaacatggccaattgctacgtgataatgtg
tacgggagtattgaagaagacgccgagcgccgcgacttctctatcaatgccctttactac
tcaattaatgatttttgtatttatgattacgctaatggcattagcgcaattaaagcgaag
caaattgagttaattggcgatccagaaacgcgctacagagaagatcctgtgcgtatgctg
cgcgctgttcgctttgccactaaattaggtatgagtattgcgcctgcaaccgaaaaacct
attgcaggcctggcaaatttattagaccacattccagcagcgcgtttatttgaagaatca
ctcaagctatttttaaatggaaaagctgaagaaaacttcattatgctacgccaatatggt
ttatttagagcactatttccagcacttgataaaatcttagatgccaatcctgatggcctt
gaacatgcgtttatcctgcaaatgtttaaaaacaccgataagcgtattaatgcagataaa
aaagtcacgccagctttcatttttgcagccttgttgtggtttccattacagagcattgct
aaaaagttacaacaacgcgatcaactgtcagagtacgatgcatttgcacaagcgatgaac
aaagtactgagtgaaaacgcgcaacatgtagctgtaccaaaacgcttcacgctaggcgct
cgcgatatttggcatattcaacaacgccttgataaacgtggtggacaacgcgcttatcga
ctgactcagcaaccacgttttaaagccgcatatgacttcttactgttacgtgttcaagca
ggtgaaactgaacttcaagagcttgctaactggtggacaaactatttagggcaggacata
aatggccaaaaagaaatggtcaaagcacttggtcatcaaggtggtccaaaacgtcgccgc
cgtccacgtaagaaaaaaacagagcaatga
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