Pseudoalteromonas sp. CF6-2: L3Q70_14740
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Entry
L3Q70_14740 CDS
T11185
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pscf Pseudoalteromonas sp. CF6-2
Pathway
pscf03030
DNA replication
pscf03410
Base excision repair
pscf03420
Nucleotide excision repair
pscf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3Q70_14740 (polA)
03410 Base excision repair
L3Q70_14740 (polA)
03420 Nucleotide excision repair
L3Q70_14740 (polA)
03440 Homologous recombination
L3Q70_14740 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscf03032
]
L3Q70_14740 (polA)
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_14740 (polA)
Enzymes [BR:
pscf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3Q70_14740 (polA)
DNA replication proteins [BR:
pscf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L3Q70_14740 (polA)
DNA repair and recombination proteins [BR:
pscf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L3Q70_14740 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3Q70_14740 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
UJX25219
LinkDB
All DBs
Position
complement(3171614..3174349)
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLVLVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVVNMLKSLIKQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHNIIKAMGFPLISIEGVEADDVIGT
FARIASEQQRHVLISTGDKDMAQLVNEHVTLINTMTDSISDPETVVEKFGVGPELIIDYL
ALMGDKVDNIPGVDGCGPKTAVKWLQKYGSLQGVIDHASEIKGKIGEKLAAALDHLPLSY
ELATIKCDVEVESELENFKLQEPNRDELIALYGECEFRRWLAELLDNPKDADTHLDVPTE
ANELPKVADAHYETILTEEQLDTLVKQLNDAELFAFDTETTSLDYMQAQLVGMSFAVKAG
EAAYIPVAHDYPDAPEQLSLETVMAKIGPILADENKAKVGQNLKYDKSVLANVGFELNGI
KFDTMLESYVFNSVGSRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEKAAPYA
AEDADITLRLHQVLWPKIDADSQLKSVFEDIELPLVSVLSDIERTGVAIDSNMLAAHSQR
LGERLLELEQEAYDMAGEKFNLGSPKQLQAILFEKLALPVIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNERTKRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFVAAKGHKIVAADYSQIELRIMAHLSQDKGLLTAFANGLDVHSATA
AEVFGVNLEDVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAADKGYVETIFGRRLHLPEINARNGARRKAAERAAINAPMQGTAADIIKK
AMLKVHQWVNAQAEGSVKLLMQVHDELVFEIKEESVDDYKAEICKLMSEAATLDVPLIVE
ADSGDNWQQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccctgaaaatccacttgttcttgttgatggttcttcttatttattccgt
gcatatcattcgccaccacaccttactaactcaaaaggtgaagcgacaggcgcaatctat
ggcgtagttaatatgctgaaaagtttgatcaaacaatatgatccatcacacatggtggta
gtgttcgatgccaaaggtaaaacctttagaaatgacatgtacagcgaatataaagccaac
cgcccaccaatgccggatgacttacgcacacagatcgcaccactgcataacattattaaa
gcaatgggttttccacttattagtattgaaggtgttgaagcggatgatgtgattggtacc
tttgcacgtattgcctctgaacaacaacgtcatgtgttgatctccacgggcgataaagac
atggcgcagcttgttaatgaacacgtaacgcttattaacacgatgaccgatagcatttca
gatccagaaaccgtggttgagaagtttggcgtggggcctgagctgatcattgattacctt
gccttaatgggcgacaaagtcgataacattcctggtgttgatggttgtggtccaaaaacg
gcggtgaaatggctacaaaaatatggatcattacaaggggtgattgatcatgctagtgaa
atcaaaggcaagattggtgaaaagcttgctgcagcacttgatcatctaccacttagctat
gaattagcgacgattaaatgtgatgttgaagttgaatcggagcttgaaaatttcaaacta
caagagcctaatcgtgatgaactgattgcactctacggcgaatgtgaattccgccgttgg
ttggcagaattactggataaccctaaagacgctgatacacacttggatgtgccaacagaa
gctaacgaactaccaaaagtcgctgatgcacactacgaaactattttaactgaagagcaa
cttgatactttagtaaagcaattaaatgacgctgaactttttgcttttgatactgaaaca
accagccttgattatatgcaagcgcaattggttggcatgagctttgcggttaaagcgggt
gaagcagcgtacattccagttgctcacgattaccctgatgcgcctgagcaattaagctta
gaaaccgttatggcaaaaattggcccaatcctcgcggatgaaaacaaagccaaagtcgga
caaaatcttaagtacgataaaagcgtattagctaacgtcggctttgaattaaacggtatt
aagttcgacactatgttggagtcgtatgtttttaatagtgtgggtagccgtcatgatatg
gactcgttggcacttaaatacctaggccataaaaatatcagctttgaagatatcgcaggc
aaaggtaaaaagcagttaacgtttaatcaaattgagctagaaaaagcggcgccgtatgcc
gcagaagatgctgatataacacttcgtcttcaccaagtgctatggccaaaaattgatgct
gacagccaattaaaatcagtcttcgaagacattgagttaccactcgtttctgtgctgtct
gatattgaacgtaccggtgtagcgattgatagtaatatgcttgctgctcatagccaacgc
ttaggcgaacgcctgttagagcttgagcaagaagcttatgatatggctggtgaaaagttt
aacttaggctcgcctaagcagctgcaagcaattttgtttgaaaagctagcacttcccgtt
attaagaaaacaccaaaaggcgcaccttcaacagctgaagaagtattgcaagagctggct
catgactatccgttacctaaggtgattatcgaacaccgtggtttatctaaactaaaatca
acgtacacagataaactaccgctaatggttaatgaacgcacaaagcgagtacatacctct
taccatcaagcagtaacagcaacagggcgcttaagctcaacggatcctaacttgcagaat
attccaattcgttcggaagagggacgtcgtattcgtgaagcctttgttgctgcaaagggg
cataagatagtggctgcggattacagccaaattgaattacgtatcatggcgcatttatca
caagataaaggtctacttaccgcgtttgctaatggtttagacgtacacagtgcaacggcc
gcagaagtctttggggtaaatcttgaagacgtaaccagcgatatgcgccgtaaagcaaag
gctgttaactttggtttaatttacggtatgtcggcgtttggcttatcacgtcaattagat
gtaccacgtcatgaagcacagcattatattgataaatactttgagcgtttcccaggtgtg
cttgagtacatggaaacaacccgtgaaaaagcagctgataaaggctatgtagagactatt
tttggtcgccgattacatttaccagaaatcaacgcaagaaacggggctcgtcgtaaagcg
gcagaacgcgctgctatcaatgcaccaatgcaaggcaccgctgctgatatcatcaaaaaa
gcgatgctgaaagttcaccagtgggtaaacgcacaagctgaaggttctgttaaattactt
atgcaagtacacgatgaattagtgttcgaaattaaagaagaatctgtggacgattataaa
gcagaaatttgtaagctaatgtctgaagccgccacgcttgatgtaccactgattgttgaa
gccgacagtggtgacaactggcaacaagctcactaa
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