Pseudoalteromonas sp. CF6-2: L3Q70_17110
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Entry
L3Q70_17110 CDS
T11185
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pscf Pseudoalteromonas sp. CF6-2
Brite
KEGG Orthology (KO) [BR:
pscf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscf03400
]
L3Q70_17110
DNA repair and recombination proteins [BR:
pscf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3Q70_17110
Archaeal homologous recombinant proteins
L3Q70_17110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
NTPase_1
SMC_N
AAA_22
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UJX27655
LinkDB
All DBs
Position
unnamed:84015..87668
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRVHQLASILDAEVDFSTSPLKEAGLFAITGDTGAGKSTLLDAVCLALYNKTARL
RGDTGNKIDFNGDNIKLNDSRNLLRRGAGQGFAEVDFIGQDKQLYRARLSFSRARNKADG
KLQPAQHSLYLLPDEALIADRSAAGKEIERIIGLSFEQFSRAVLLAQHEFAAFLKATGDE
RAQLLECLTGTDKFSRIGQRIFERHREQLQALEQLKLSLSNYQVLSPEEVETKQAEHKAL
EAKLAELQKQIKQFEQFQAWYKQALQQQQQLNQAEQAKQELQQQMHALAEKATEAKQAQQ
CLEIKDNRERVTSITAQHGQLIKNREQLLNVDHKTLIKDAEQTLEKQTAQLNQAKQAQKD
AQPIISQARELDKQLAVLNQQAAVQKVQAEKAKHHYQELTNTLNSHKAEQQKQLKQQAQI
NGYLETHAQWQPLAKDWSFYKSELSRFSQQQHTISQSQQNVKALQPKIDEQQTAAQQCKT
QYQALEQEIKRLNEQDAAFKSSLNTQSMADIDAGLEAIKHLIEKRQVWQTNHQQLKNWQT
QLKALSQTEQQLQTALKDAQQGAEQAQQQVSLCEQNLQQVQLRASEGVSQLRATLKAGEP
CAVCGSKEHPFMHEEMVNEQFSQLINDFTKELTNAKQHLKAQQILQQAKSNELAACSQQI
SSLNGQISELSAQQQSLKETMAASRTELNDLTEAQLNERQQQLSQQKQQYYKTLEQQQQL
QNTLATKQAEYNKQGQTLHSKEQQLNELQQQLNNLQTRLNELNDEHQQLHATLNQQFTSA
PWWQALNTQNISLEVIAEHVEAYQASLQTADELKASLKAIEQHLAHVTPQLNEAHTSLTQ
CNEQLSQTQTELTQIQSKREGLLSNAAISVDEFIAELEKAVDSAQQALQLALTTHSNAVK
ARDEQAIQIANLDEREKELNAEHAALNERFSHWFSDFKAQHPSLDEQAVSQLLTINPTEI
KKTLADHHTAESSLKDAEALLKQLQKAQAQHQKDKPALSEDELQIQLNQTTEQQVQANNA
LLQVATELKTHQQNSQALADKQKQLVEQQKSYEHWHLLNKVLGDASGKTMRNLAQTQTLK
ILLHYANSHLQTLNKRYKLTAIGLTLDIAIIDRDMADEQRSVNTLSGGESFLVSLALALG
LASLSSNKVQINSLFIDEGFGTLDSETLSIAMDALDSLQAQGRKVGVISHVSEMTERVAT
QVHVAKKPGGYSTISVI
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagcaattcgtgttcatcaactcgcctctatcttagacgccgaagtcgac
tttagcacttcgcctttaaaagaggcgggactatttgccatcacaggtgatactggcgcg
ggtaaaagtactttactcgatgccgtttgcttagcactgtacaacaaaaccgcacgacta
cgaggtgatacaggcaataaaattgactttaatggcgacaacatcaaactcaatgactcg
cgaaacttattacgccgcggggcagggcaggggtttgccgaagtcgactttataggccaa
gacaaacagctttaccgtgcaaggttaagctttagccgcgctcgtaataaagctgatggt
aaattacagcccgcacaacatagcctctatttattacctgatgaagccctcatcgctgat
agaagcgcagcaggtaaagaaattgaacgtattattggtttgagctttgaacagttctca
cgagctgtactgcttgcacaacatgaatttgccgcctttttaaaagcaaccggtgatgaa
cgtgcgcaattacttgaatgtttgacaggcaccgataaatttagccgtattggtcagcga
atttttgaacgccatcgtgagcagctgcaagcattagagcagttaaagttaagtttaagt
aattatcaggttttaagccctgaagaggtcgaaactaaacaagcagaacacaaagcgctt
gaggctaaacttgctgagttacaaaaacaaataaaacaatttgaacagttccaagcgtgg
tataaacaagcattgcagcagcaacaacagctaaaccaagctgagcaagcaaagcaagag
ttacagcaacaaatgcacgcgcttgctgaaaaagccactgaagcaaaacaagcccagcaa
tgcttagaaataaaggataaccgtgaacgcgtcacttcgattacagctcaacatgggcaa
cttattaaaaaccgggagcagcttttaaacgttgaccataaaacactaatcaaagacgct
gagcaaacgcttgagaagcaaactgcgcaactaaaccaagcaaagcaagcacaaaaagac
gcgcaacctattattagccaggcccgtgagttagataaacaacttgcggttttaaatcag
caagcagcggtgcaaaaagtacaagcagaaaaagcaaagcaccattatcaagagctgact
aatacactaaatagccataaagccgagcagcaaaaacagcttaagcagcaagcgcaaatc
aatggctatttagaaacacatgcacaatggcaaccattagcaaaagactggtcattctat
aaaagtgagttaagccgctttagccagcaacagcacacaattagccaatcacagcaaaac
gtaaaagctcttcagcctaagattgatgagcagcaaacggccgcgcagcagtgcaaaact
caataccaagcccttgagcaagaaattaagcgcttaaatgaacaagatgccgcctttaaa
tcgagtttaaatacccaatcaatggcggatattgatgcggggcttgaggcgattaagcac
ctgattgaaaagcgccaagtgtggcaaactaatcatcagcagttaaaaaattggcaaacc
cagctaaaggcattaagccaaactgagcagcaactacaaaccgcactaaaagatgcgcag
caaggggcagaacaagcacagcaacaggtttcgctttgtgagcaaaacttacagcaagtg
caattaagagccagtgaaggagtcagccagttacgtgccaccttaaaagcaggggagccg
tgcgcggtatgtggctcaaaagagcacccatttatgcatgaagaaatggtgaacgagcaa
tttagccagcttattaacgactttaccaaggagctaactaacgccaaacagcatttaaaa
gctcagcaaatattacagcaagctaaaagtaatgagctggcggcatgcagccaacagata
agctcattaaacgggcaaatctcagaactgagtgctcaacaacagagcctcaaagaaact
atggcagcaagccgtactgagctaaatgatttaaccgaagctcagttaaacgagcgtcag
caacaactgagtcagcaaaaacagcaatactataaaacccttgagcagcaacaacagctg
caaaatacgcttgcgactaagcaagctgagtacaataagcaagggcaaacgctgcatagt
aaagagcagcaactaaacgaattgcagcaacagctaaataatctgcaaacacgcttaaat
gagctcaatgatgagcatcagcagctacatgccacactgaatcaacagttcaccagtgca
ccttggtggcaggcactcaatacacaaaacatttctttagaggtcattgcagagcacgtt
gaggcttatcaggcgtcgctgcaaactgcggatgagcttaaagctagtttaaaagccatt
gagcagcaccttgcgcatgtaacaccgcagcttaacgaagcacatacctctttaactcag
tgcaacgagcaactaagccaaactcaaaccgaattaacgcagatacaatcaaagcgcgag
ggcttattgagtaacgcagcaatatcggtagatgagtttatagcagagcttgaaaaggcg
gtagattccgcgcagcaggcactgcaacttgccctgacaacccatagtaatgcggtgaag
gcgcgtgacgaacaagccattcaaatagcaaatcttgacgaacgtgaaaaagaactaaac
gctgaacatgcggcacttaatgaacgctttagccattggtttagcgattttaaagcgcag
cacccaagtttggatgaacaagcagttagtcagctattaacgataaacccaactgagatc
aagaaaacattggctgatcaccacactgccgagagtagcttaaaagacgctgaggcactg
ttaaaacagttacaaaaagctcaagctcagcaccaaaaagataaacctgcactgagtgaa
gatgagctgcaaatacagcttaatcaaacaacagagcaacaagtgcaagctaataacgca
ttattgcaagttgcgacggagcttaaaacccatcaacaaaatagccaagcgctggcagat
aaacaaaagcaattagtagagcagcaaaaaagctatgaacactggcatctactcaataag
gtattgggggatgccagcggcaaaacgatgcgtaatttagcgcaaacgcaaaccttaaaa
atactgttgcactacgcgaatagtcacttacagacactaaataaacgctacaaattaacc
gctataggactaaccctcgatatcgcaattatcgatagagatatggccgatgagcagcgc
tctgttaatacgttatcgggtggtgagtcatttttggtgtcgttagccctcgcattaggg
cttgcctccttatcgtcaaataaagtgcaaataaactctttgtttatcgacgaaggtttt
ggtacgttggacagtgaaacgttaagcatcgcgatggatgctcttgattctctgcaagca
cagggccgcaaagtcggggtgatttctcacgtctcagaaatgaccgaacgcgttgccacc
caagtgcatgtggcgaaaaaaccaggtggttattcgaccatctcagttatttaa
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