KEGG   Pseudoalteromonas sp. CF6-2: L3Q70_19765
Entry
L3Q70_19765       CDS       T11185                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pscf  Pseudoalteromonas sp. CF6-2
Pathway
pscf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pscf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    L3Q70_19765 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pscf02044]
    L3Q70_19765 (tssM)
Secretion system [BR:pscf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   L3Q70_19765 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Wzy_C DUF2085
Other DBs
NCBI-ProteinID: UJX27483
LinkDB
Position
unnamed:complement(690376..693876)
AA seq 1166 aa
MSFIQKCKRAMYALTSRKVMIVIGFIALFLLIWFGGPLISIADYTPLASVAARAILILAI
LLIYTLTKLLHLRKQNKRNESMAEELIEVDEGAGDEIQEEIKTLKARMVEAIELLKNAKL
FNGRNIYQLPWYIMIGPPGAGKTNIINNSGLDFPLKDKLGTDLVHGVGGTRNCDWWFTNK
AVIIDTAGRYTTQNSHALHDAKAWQGFLGLLRKYRPKRPINGVVISMGISELMNQTKTER
NLHARAIKQRLQELQSQLGMTFPVYVILSKVDLIEGFREFFCELSDEECEQVWGVTFELD
ANSDNQMDAFNKEFHALISNLTTLLNRRLINEHDLTNRSKIFEFPKQLRVLQNVGYSFLK
EIFTPNAYESLPIFRGVYLTSSTQEGVPSNLLNEQSTVKKDYINQTRSFFIKRLLEKVIF
PEQNLASTNKHHEKQNKWLRISCLAVTSVVLLGLSISWYVSFSWNNELISKTDNALSEYQ
ALDQNTVDKANLIVLNQRFNMLKNFPVNQLEADDFEAYGFSKVEPLTEASQKAYIRSLKT
YLEPYLLNALTSEMTEQADYLSYLYETLRCYLMFFEPEHYNNEDVLAWFSAYYERNLPGD
VNFQTRAELFEHTKALLEHGFSESEIDHQAVRLARAELTKLPIAERAYQRLQADFIDSSI
PPFKLTDIISYESAKQFSFQNSDSIMKSIPGLYTYNGYHGIFNVEKSKMLGNLMASSWVY
GEEASGTYDISKADIEKKLEQKYFQDYIYYWRSFINELSLNEFNSPNEGVRVTDVLAGPE
TPIKNIITTVQKNVRLTKLPISENQKAAGKVAANAAEVAMHTKANRLKRYLPNEAPQFDI
KLPGYQVEEAFSDILEIDEQQLEQIQASLRELNIYLNQLDRGGLLKSSVKNQLSGKSKPE
FLSQLEFQSKGLPYPANNWLLNISQDTSNITRSSANRHLNEIWKSTVLREYNDAIVGRYP
FVSTSSKEVNLKDFSDFFGPDGTIDSFFNTYIAPSVDTSKSPWRFEKNIGVSKSALEMFE
KAAKIREVFFDGNSKTPRIEFGLKPLKLDQTVSSFMLEIDGQSMIYRHGPPKVKSIVWPG
DVAQNKTRIVFTPPYGGRTINASYEGEWSLYRMLDDLQAKRAQTEKDLQLQFSLQGNNAT
VELLPKSIRHPFWNASIESFSCPTRL
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgagttttattcaaaagtgcaagcgtgctatgtacgcgcttacctctcgtaaagttatg
attgtaattggctttatagcgctcttcttgttgatctggtttggcggtccattgatctct
attgctgattacactcctttggcaagtgttgcggcacgcgcgattctgatacttgctatt
ttattaatttataccttaaccaagctattgcatctaagaaagcaaaataaacgcaacgaa
agcatggccgaagaactaattgaggttgatgaaggtgctggcgatgaaatccaagaggag
atcaaaacattaaaagcacgtatggttgaggcaattgaattacttaagaatgctaagtta
ttcaacgggcgaaacatctaccaattgccttggtatatcatgattggccctcctggtgct
ggtaaaacaaatatcatcaataactcaggtcttgattttccgttaaaagataagcttggc
actgatttagtgcatggtgtgggcggaacgcgaaactgtgactggtggttcaccaataaa
gccgtgattattgacactgcagggcgctatacaacacaaaatagtcatgctctacatgat
gcgaaagcatggcaaggatttttaggcttattaagaaagtaccgcccgaaaagacctatt
aatggtgtggtgattagtatgggcatctctgaattaatgaaccaaacaaaaacagagaga
aacttacacgcacgcgccattaaacagcgcttacaagagctacaaagtcaacttggaatg
acattccccgtgtatgttattttatcaaaagttgacttaattgaagggtttagagagttc
ttttgtgaactcagcgatgaagagtgtgagcaagtttggggtgttactttcgagcttgat
gctaactctgacaatcaaatggatgcatttaataaagagtttcacgcgcttatctctaat
ttaacaacattacttaatcgacgtttgatcaatgaacatgatctaacgaatagatcgaag
atctttgagtttcctaaacagcttcgtgttttacaaaatgtcggttattcattcttaaaa
gaaattttcacacctaatgcatacgagagcctgccaatattccgcggtgtttatttaaca
agttcgactcaagaaggcgtgccttcaaacctgttaaacgagcaaagtacggtaaagaaa
gattatattaatcagacaagaagcttctttattaaacgcttattagaaaaagtcattttt
cctgagcaaaacttagcaagcactaacaaacaccatgaaaagcagaacaagtggctacgt
atatcttgcttagccgtaacgagtgttgttttattaggcttgagtatttcttggtatgtg
agcttttcgtggaacaatgagcttatcagcaaaaccgataatgcgctcagtgagtatcaa
gctcttgatcaaaatacggtcgataaagcgaacttaattgtgctaaatcagcgctttaat
atgcttaaaaatttcccggttaatcagttagaagccgatgattttgaagcttatggcttt
agcaaagtagaacctctcacggaggcttcgcaaaaagcatatatacgttcattaaaaaca
tacttagagccttacttattaaatgcgctgacctctgagatgacagagcaggctgattat
ttaagttatctctacgaaaccttacgttgttatttaatgttctttgaacctgagcattac
aataatgaagatgtgcttgcttggtttagtgcatattacgagagaaacttaccaggcgat
gttaatttccaaacacgtgctgaattatttgagcatacaaaagcattgttagagcatggt
ttctctgaatcagaaattgatcatcaagctgtgcgattagcacgagcggagctaactaag
ttacctattgcagagcgtgcttatcaaaggttgcaagctgactttatcgacagcagcatt
ccgcctttcaaattaactgacattatcagctatgaaagtgcgaaacagtttagcttccaa
aactcagactcaatcatgaaaagtatcccaggtctttatacttataatggctatcatggc
atcttcaatgttgagaaaagtaagatgttgggtaacttgatggcaagtagctgggtgtat
ggtgaagaagcgtcagggacctatgatatttcgaaagcagatatagagaaaaagcttgaa
cagaaatatttccaagattacatctattattggcgctcgtttattaatgaactttcgcta
aatgagtttaactcacctaatgaaggcgtcagagttactgatgtgttggcgggtccagaa
actccaataaaaaatattattaccaccgtacaaaagaatgtgcgtttaactaagctacct
atttcagaaaatcaaaaggcagccggtaaggttgcggcgaatgccgctgaagttgcaatg
catactaaggctaatagacttaagcgttatttgccaaatgaagcaccacagtttgatata
aagcttccgggttatcaggttgaagaagcctttagtgatattttagaaattgatgagcag
caacttgagcaaattcaagcaagtttaagagagttaaatatttacttaaatcaacttgat
agaggcgggttactaaaatcatctgtaaaaaatcaattaagtggtaagagtaagcctgag
ttccttagtcaattagagttccagagtaaagggttaccttatcctgcgaacaattggtta
ttgaatatcagtcaagatacatcaaatatcaccagaagcagtgcaaatcgtcatttgaat
gaaatatggaaaagtactgttttacgtgagtacaacgatgcaattgtgggtcgttatccg
tttgtttcgacttcatctaaagaggtaaatcttaaagatttctcagacttttttggtcca
gatggcacaatcgatagcttttttaatacttatatcgcaccaagtgtcgacaccagtaag
agcccttggcgattcgaaaagaatatcggtgtaagcaagtcagcattagaaatgtttgaa
aaagccgccaaaattcgcgaagtattttttgatggtaacagcaaaacaccgcgcattgag
tttggtttaaaaccattaaagttagatcaaacagtttccagtttcatgcttgagatagat
ggtcaatcaatgatttatcgtcatggtccacctaaagttaaaagcatcgtttggcctggt
gatgtcgctcaaaataaaacgcgtattgtgtttactccaccatatggaggacgcactatc
aatgccagctacgagggtgaatggtctttgtatcgcatgttagatgacttacaggcgaaa
agagcacagacagaaaaggatttacagctgcaattttcattgcaaggaaataatgcgaca
gttgagttactgccaaaatcgattagacatccattctggaacgcaagtatagagagtttt
tcatgtccgaccaggctttaa

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