Prevotella scopos: J4856_01310
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Entry
J4856_01310 CDS
T08373
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pscj
Prevotella scopos
Pathway
pscj00061
Fatty acid biosynthesis
pscj01100
Metabolic pathways
pscj01212
Fatty acid metabolism
pscj02024
Quorum sensing
pscj04146
Peroxisome
Module
pscj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J4856_01310
00071 Fatty acid degradation
J4856_01310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J4856_01310
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4856_01310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pscj01004
]
J4856_01310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pscj04147
]
J4856_01310
Enzymes [BR:
pscj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J4856_01310
Lipid biosynthesis proteins [BR:
pscj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J4856_01310
Exosome [BR:
pscj04147
]
Exosomal proteins
Exosomal proteins of breast milk
J4856_01310
Exosomal proteins of breast cancer cells
J4856_01310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
QUB44643
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All DBs
Position
1:362688..364352
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AA seq
554 aa
AA seq
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MYSKTSFNSIIEQSIKDNWDKDALTDYLGATLQYHDVARKIEKLHILFENSGLKKGDKVA
LCGRNSSSWAVAFFATLSYGAVAVPVQHEFKPEQIYNIVNHSESKLLFVGDVVATTIDGE
QMPALEGIIYLPDFSLILSRSETLTHARENLNALFGKKYPKFFRAEDVNYYKDEADDLAL
INYTSGTTGFSKGVMLSYRSVRSNLAWATAEIKPHIKPDSNVLCMLPMAHMYGMICEFIC
QFSFGSHLYFLTRLPSPSLIAQACRDIQPAIIMAVPMVVEKIIRKNVFPKVQSTSTRMLL
KMPVVSKKVKEKIRSIVMDTFGGNAYEVVTGGAALNKEIEDFLVSIDFPITSVYGATECG
PLVTFSDYKDFVPGSCGTPVMNMEVKIVSPDPINVTGEVITRGENVMLGYFKNEEATKEV
LDTDGWYHTGDLGTMSADGHLFIRGRIKNMLLGSNGQNVYPEEIEDKLYSLSMVSECIVI
QRGDKIVGLVYPDLEEAKEMGFTQADLQDVMEQNRVELNRMLPTFCHLSAIELRDEEFAK
TPKKSIKRYLYQDK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtattctaaaacaagtttcaactcgattatagaacagagtatcaaggataactgggat
aaggatgctctgacagattatctaggtgctacacttcagtaccatgatgtagcacgtaaa
atagagaagttacacattctctttgagaatagtggattgaagaaaggtgataaggtagct
ctatgtggtagaaactcttcttcatgggctgttgctttctttgcaacactctcgtatggc
gctgtggctgtaccggttcagcatgagtttaagccagaacagatatacaatattgttaat
cactcagaatcaaaactcctctttgtaggtgatgttgttgcaacaacgattgatggtgag
cagatgccagcgttggagggtattatttatctcccagacttttcgttgatactatctcgt
tcagagactttgacacatgctcgtgagaacttaaatgcactctttggaaagaagtatcca
aagttcttccgcgcagaggatgtaaactattataaagatgaggctgacgacctagcattg
attaattatactagtggaacgacgggtttttcaaaaggagtcatgcttagttaccgctct
gtgcgtagtaatctcgcctgggcaacagctgaaattaaaccacatatcaaaccagatagc
aatgtcctttgtatgttgccaatggctcacatgtacggtatgatttgtgagtttatttgt
cagtttagttttggtagccatctttatttcctcacgcgtctgccaagtccttctttgatt
gcacaagcctgtagagatattcagcctgctatcatcatggcagtgccaatggttgttgag
aaaatcatccgtaagaatgtcttccctaaggtacagagcacctcaacccgcatgttgtta
aagatgcctgtcgttagcaaaaaggtgaaggaaaaaatccggtcgatagtaatggatacc
tttggtggaaatgcttacgaggtagttacgggtggagctgcgcttaacaaagagatagaa
gatttcttggtaagcattgatttcccaataacaagtgtttatggagctaccgagtgtggt
ccactggtcacatttagcgattacaaggattttgtaccaggttcctgcggtacaccagtc
atgaacatggaagttaagattgttagtcctgatcctataaacgttacaggtgaggtgatt
accagaggtgagaacgtcatgcttggttatttcaagaatgaagaggctacgaaagaagtt
ctagatacagatggttggtatcacacgggtgaccttggtacgatgagtgctgacgggcat
ctgtttatccgtggacgtattaagaacatgcttttaggttctaacgggcagaatgtctat
ccagaagagatagaggataaactctattcattgtctatggtcagcgagtgtattgtcatt
cagcgtggtgataaaatcgttggtttggtttatccagatcttgaagaagcaaaggaaatg
ggcttcacacaagccgacttgcaagacgttatggaacaaaatcgagtagaactcaatcgt
atgttaccaactttctgccatctatctgccatagagctacgtgatgaggagtttgcaaag
acgccgaaaaagagtattaagcgttatctctaccaggacaaataa
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