Prevotella scopos: J4856_01435
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Entry
J4856_01435 CDS
T08373
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pscj
Prevotella scopos
Pathway
pscj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4856_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pscj03021
]
J4856_01435
Transcription machinery [BR:
pscj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4856_01435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_10
HTH_40
Sigma70_ECF
HTH_23
HTH_24
PylD_N
HTH_11
DSBA
HTH_28
PhyR_sigma2
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
QUB44665
LinkDB
All DBs
Position
1:complement(393917..394441)
Genome browser
AA seq
174 aa
AA seq
DB search
MTLPEQRFRQIFRALYPSLSFYATRLVQDDEAEDIVQEAFMELWKRKEDIEDESHIKAFL
YRIVYTRALNVIKHRTIVNNHADSVKKVTQFKLDYYNPEANDVMGYIEGLETRKQINDAI
GELPAKCREVFILSYQHDKKNKEIAEQLGISIRTVEVHLYKALKTLRARLKQHA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgacattaccagagcaaaggttccgccagatatttagggcattatatccctccctctcc
ttttatgctactcggcttgtacaagacgatgaggcagaggatatcgtgcaggaagctttc
atggagttgtggaaacgcaaagaagatattgaagacgaaagccatattaaggctttcctc
tatcgaattgtctatactcgtgccctgaatgtcattaagcatcgcaccattgtaaacaat
catgctgacagcgtaaagaaggttacgcagttcaagttagattactataacccagaggct
aatgacgtgatgggctatattgaaggactggagacaagaaagcaaatcaacgacgccatt
ggagaacttccggctaaatgtcgcgaagttttcatactgagttaccagcacgacaagaaa
aacaaggagatagcagagcaattaggtatctcaattcgtacggttgaggtgcatctctac
aaggctttaaagaccttaagagcacgactgaaacaacacgcgtaa
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