Prevotella scopos: J4856_02025
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Entry
J4856_02025 CDS
T08373
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pscj
Prevotella scopos
Pathway
pscj03420
Nucleotide excision repair
pscj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4856_02025
03430 Mismatch repair
J4856_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_02025
Enzymes [BR:
pscj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4856_02025
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4856_02025
MMR (mismatch excision repair)
Other MMR factors
J4856_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
QUB44769
LinkDB
All DBs
Position
1:541987..544542
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AA seq
851 aa
AA seq
DB search
MINQDKEETILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLLDKGLAPWNI
LALTFTNKAAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGETIGFGNNFTIYDE
SDSRSLIKSIVKALDLDEKTYKPASVHNFISMAKNHLITAAEYAEDRAAIERDRSARMPA
IHMIYKAYEARCRQANAMDFDDILLYTFLLFRDNKEIREKYGQQFEYILVDEYQDTNYAQ
VSIISQLAETHRRICVVGDDYQSIYSFRGANIDNILDFKHKFDDAKLFKLERNYRSTQLI
VQAANSLMKHNERQIPKDVFSKEAEGDKILYKPCYSDREEAMVVANELKRIKRNDDCDYG
HFAILYRTNAQSRSFEDEFRKQGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPDDEEAFR
RIINYPTRGIGNTTVQKIIDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISG
FIKNVALKDAYELGKDIIEESGVSADIRSGSEPEDLARRENLEEFMSAMQGFVDAGREEG
REENVYLTDYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEENIFPSPM
SASSRREIEEERRLLYVAITRAERHCILTNAKNRFRYGSMQIDNPSRFLNDFDPTLLHVE
DEVNSALGGERRKMPWDEDNNSRSAWGRNRSDDNFREYEPNKAYTGSRPWGQEYRQMGSR
WQNSNPVASQFRADPKPKITERKRPEAAVDPFSERTKRKLIAEGGNFKRLSSAMTNGGRT
LSSESTSISSASSTASVAGLSVGVTIEHQRFGIGKVLNLEGSGENAKATVEFRNAGTKQL
LLKFAKFKVVG
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcaagataaggaagagactatcctctccgcactgaatgaaagccagcgtgag
gcagtagagtattgtaccggaccatcattagtgattgctggtgctggctctggtaagaca
cgtgtgcttacctataagattgcttacctgcttgataaaggtttagctccatggaacatt
cttgcacttacgtttacaaacaaagctgcaagagagatgaaggaacgtattgcacagata
acaaccgctaaagatgcacaacacctttatatggggactttccattccatcttcgcacgt
atcctgcgtcgtgaaggagagactattggctttggaaataattttactatttatgatgag
agcgactcacgttcacttatcaagagtattgtaaaagccttagaccttgacgagaaaacg
tataagcctgcttcggtgcataactttatctcaatggcaaagaaccatcttatcacagct
gcagaatatgcagaagatcgtgctgctattgaacgtgatcgaagtgcacgtatgcccgca
atccacatgatttacaaagcatacgaagcaagatgtcgtcaggcaaatgctatggacttt
gatgatattttgctttataccttcttgctcttccgtgataacaaagagattagagagaag
tatggacagcagtttgaatatatcttggtagatgagtatcaagacacaaactatgcacag
gtaagtatcatcagtcagctggctgagacacatcgtcgtatctgcgttgtgggtgacgac
tatcagagtatctattctttccgtggtgcaaacattgacaatatccttgacttcaagcat
aagtttgacgatgctaaactctttaagttagagcgtaattaccgctcaacacagctcatc
gtacaggctgctaactcgttgatgaaacacaacgaacgacagattcctaaggatgtgttt
tctaaagaagccgaaggagataagattctctataagccttgctacagtgatagggaagag
gctatggttgttgcgaatgaactgaagcgtatcaaacgcaatgatgattgcgattatggc
cactttgccatcctttatcgtacgaatgcacagagtcgttctttcgaggatgagtttcgc
aaacaagggataccttacaagattatcggtggactttctttctatcaacgtaaggaaatt
aaagatatcatcgcatattttcggttggtctctaatcctgatgacgaagaagcattccga
cgtatcatcaattacccaacacgtggaattggtaatacgactgttcaaaagattattgat
tgtgcccaacgaaattctgtttcgctatgggaaaccatcctcaatcctatacaatatgga
ttagatgtcaataaaggtacaatgacaaagctttttgcttttagaacgcttataagtggg
tttattaagaatgtagcactcaaagatgcatacgagcttggaaaagacattattgaagag
agtggggtaagtgctgatatccgttctgggagcgaaccagaggacttggctcggcgagag
aacttagaagagtttatgtcggctatgcaggggtttgtggacgctggacgcgaagaagga
cgtgaagagaatgtctatcttactgactaccttcaggaagtagctttatacacagatgct
gacaaggaagacgatgataccccgaaagtgacattgatgacaattcatgcagcaaaggga
ttggaattccctacggtatttgtcgttggattggaggaaaatatattcccaagtcctatg
tcagcaagttcaagacgtgagatagaagaagagagaagactactctatgtggctataact
cgtgccgaacgacattgtatattgacgaatgcaaagaatcgttttcgctacggatcaatg
caaattgacaatccaagtcgattcttaaatgattttgatcctacactgcttcatgtagaa
gatgaagtaaacagtgctttgggaggtgaacgacgtaagatgccttgggacgaggacaat
aactcaagaagtgcttggggacgtaatcgttcagacgataacttccgtgaatacgaacca
aacaaagcatacacaggtagcagaccttggggacaagaatatcgtcaaatgggttcaaga
tggcagaactcaaatcctgttgcaagccaatttcgtgctgatccaaagccgaagataact
gaacgtaaacgtccagaagctgctgttgacccattctcagagcgtactaaacgcaaatta
atagcagaaggtggtaattttaaacggctgtcgtctgcaatgacaaatggcggtagaaca
ttatcttcagagagtacttcaatatcctcggcttcatcgacggcttcagtagctggactc
agtgttggtgtgaccattgaacatcagcgctttggcattggaaaggtattaaatcttgaa
ggctctggagaaaatgctaaggctaccgttgagttccgtaatgcaggaacaaaacaacta
ttgctgaagtttgccaagtttaaggttgttgggtaa
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