Prevotella scopos: J4856_02325
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Entry
J4856_02325 CDS
T08373
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pscj
Prevotella scopos
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscj03032
]
J4856_02325
03036 Chromosome and associated proteins [BR:
pscj03036
]
J4856_02325
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_02325
DNA replication proteins [BR:
pscj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J4856_02325
Chromosome and associated proteins [BR:
pscj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J4856_02325
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J4856_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Herpes_UL6
RuBisCO_activase_AAA_helical
Motif
Other DBs
NCBI-ProteinID:
QUB44825
LinkDB
All DBs
Position
1:622625..622903
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AA seq
92 aa
AA seq
DB search
MTKADIINEIATSTGIAKKDVSAVVESFMEAIKDSLLDKKENVYLRGFGSFIIKHRAEKT
ARNISKNTTITIPAHDFPSFKPAKTFIEDMKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcatcaatgagatagcaacgtccacaggtattgccaaaaaagac
gtttcagctgtggttgagtcttttatggaagctattaaagacagtttgttggataagaaa
gagaacgtttaccttcgtggtttcggtagcttcattattaagcatcgtgcagaaaagaca
gctcgtaatatctcaaagaatacgacgattactattcctgctcacgatttcccaagcttc
aagccagcaaagaccttcatcgaggatatgaagaaataa
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