Prevotella scopos: J4856_02445
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Entry
J4856_02445 CDS
T08373
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pscj
Prevotella scopos
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscj03032
]
J4856_02445 (gyrA)
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_02445 (gyrA)
Enzymes [BR:
pscj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J4856_02445 (gyrA)
DNA replication proteins [BR:
pscj03032
]
Prokaryotic type
DNA Topoisomerases
J4856_02445 (gyrA)
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4856_02445 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2153
ABC_tran_CTD
GDA1_CD39
Fe-S_assembly
Motif
Other DBs
NCBI-ProteinID:
QUB44848
LinkDB
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Position
1:complement(660314..662893)
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AA seq
859 aa
AA seq
DB search
MDENQTIDQDRIMKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILFGMRGIG
NFSNQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMGQDWNMRYKLVDGQGNFGSVDGDS
AAAMRYTECRLSKMGEHVMDDIEKDTVDMVNNFDDTLREPAVMPTKIPNLLVNGGNGIAV
GMATNIPTHNLGEVIDGCCAYIDNPEISTDGLMEFIPAPDFPTGAYIYGLQGVKDAYETG
RGRVVMRAKAEIESDESHDKIVVTEIPYGVNKQQLIEYIADLVKEGKLEGISNVNDETGR
QGMRIVVDVKRDANANVILNKLFKMTALQSSFSVNCIALVAGRPRLLSLRECIKYFVEHR
HDVTIRRAQFDLKKAQERAHILEALIKACDNIDEVVRIIRASKTPSEAQKNLEKRFDFDE
LQSKAIVDMRLSQLTGLRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKEELQEVKEK
YGDVRRTEIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGART
REKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEGDKNSKGRAIQNMLSLEPGDSVN
AFLRIQGLDDDAFLDSHYVVFATKQGIVKKTSLRAYSRPRTNGVIAININEGDEVVDVRL
TNGHNELIIADRNGRACRFDEENIRTMGRVSTGVRGMRLDDDGQDEVIGMIVVNDPVNET
VMVVSEEGYGKRSQVEDYRLTNRGGKGVKTLNITDKTGKLVAIKNVTDDNDLMIINKSGI
VIRMSVAECRVMGRATQGVRLINLAKKNDVIASVCKVMSSEMESEVEEENNEELPNNAEN
IEREASSADNTEVTPVDFE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatcaaacaattgatcaggacagaattatgaagatcaacatcgaggaggag
atgaaaagctcctacatcgactactcaatgtcggtgattgtggcacgtgccctccctgat
gttcgtgacggttttaagcctgttcaccgccgtatcctcttcggtatgcgcggtatcggt
aactttagcaaccagccttacaagaagtgcgcccgcgttgtcggtgaggtacttggtaag
tatcacccacatggtgactcttctgtttacggtgcgcttgtgcgtatggggcaggattgg
aatatgcgttacaagttggttgatggacagggtaactttggttctgtcgatggtgactct
gctgctgcgatgcgttatactgagtgccgcctctcaaagatgggtgagcacgttatggac
gatatcgagaaggatacggttgacatggtcaacaacttcgacgatacgttgcgcgaacca
gctgtgatgcctacaaagattcctaacctgcttgttaatggtggtaatggtatcgctgtg
ggtatggcaacaaatattcctacgcataatcttggcgaagttatcgatggatgttgtgct
tatattgataatccagagatatctactgatggtttgatggagtttattcctgctccagac
ttcccaacgggtgcttatatttatggtcttcaaggtgttaaagatgcctatgagactggt
cgtggtcgtgtggttatgcgtgccaaggcagagattgagagtgatgagagccatgataag
attgttgtgacagagattccttatggagttaataagcagcaacttattgaatatattgct
gacctcgtgaaggaaggcaaacttgaaggaatttctaatgttaacgacgagacgggccgt
cagggtatgcgtatcgttgttgacgtgaagcgtgatgcgaatgcaaacgttattctgaat
aagctcttcaagatgacagctttgcagagttctttctctgtaaactgtatcgcattggta
gcgggtcgtccacgtctgttgagccttcgtgagtgcattaagtacttcgttgagcatcgt
catgacgtaaccatccgtcgtgctcagtttgaccttaagaaggcacaagaacgtgcacat
atcttggaggcattgattaaggcttgtgacaatattgacgaggttgtacgtattattcgt
gccagcaagacaccttctgaggctcagaagaaccttgagaagcgttttgacttcgatgag
cttcagtcaaaggctatcgttgacatgcgtttgtcacagctgactggtcttcgtcttgat
cagttgcatcaggagtttgaggaattgatgcaaaccatcaaggacttgcaggagattctt
aataatcctgagcgttgcaaggaggtaatgaaggaagagttgcaggaggttaaggagaag
tatggcgatgttcgtcgtacagagattatccctgatgagcatgagtttaatgctgaggat
ttctatcctaatgaccctgttgttattactatcagccaccttggttatatcaagcgcaca
ccgcttgcagactttaaggagcaggcgcgtggtggtgtaggttctaagggtgctcgtact
cgtgagaaagacttcaccgaatatatctatccagcaacaatgcaccagacaatgctgttc
tttactcgtaagggacgctgctactggatgaagtgttatgacatccctgagggtgataag
aactcaaagggccgtgctattcagaatatgctctcacttgagccaggagattctgttaac
gcattcttgcgtattcagggcttggatgatgacgccttcctcgattctcactatgtagta
tttgctacaaagcagggtatcgttaagaagacttcactccgtgcttactcacgccctcgt
accaatggtgtgattgctatcaatatcaacgaaggcgacgaggtggtagatgttcgtttg
acaaatggtcataacgaacttatcattgctgaccgcaatggtcgtgcttgccgcttcgat
gaggaaaatatccgtacaatgggtcgtgtttctactggtgtacgtggtatgcgtctggac
gatgacggacaggacgaggttattggtatgattgttgttaatgatccagttaacgagact
gttatggttgtatctgaagagggttatggaaagcgctcacaagttgaagactaccgattg
actaatcgtggcggtaagggtgttaagacactgaatattacggataagactggtaaactt
gttgctatcaagaacgttactgatgataatgacttgatgattatcaacaagagcggtatt
gttattcgcatgtcagttgctgagtgccgtgttatgggtcgtgcaacgcaaggtgtacgc
cttattaacctcgcaaagaagaacgatgtcatcgcatcagtatgtaaggtgatgagttct
gagatggagtcagaggttgaggaagaaaacaacgaagaacttccaaacaacgctgagaat
atcgagagagaggcatcatcagcagataacactgaggtaacaccagttgatttcgagtaa
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