KEGG   Prevotella scopos: J4856_03535
Entry
J4856_03535       CDS       T08373                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pscj  Prevotella scopos
Pathway
pscj03030  DNA replication
pscj03430  Mismatch repair
pscj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pscj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J4856_03535
   03430 Mismatch repair
    J4856_03535
   03440 Homologous recombination
    J4856_03535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pscj03032]
    J4856_03535
   03400 DNA repair and recombination proteins [BR:pscj03400]
    J4856_03535
Enzymes [BR:pscj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J4856_03535
DNA replication proteins [BR:pscj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J4856_03535
DNA repair and recombination proteins [BR:pscj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J4856_03535
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QUB44095
LinkDB
Position
1:931721..932212
AA seq 163 aa
MQDFAAIDFETANFERCSVCSVGVVVVRGGEIVDSFYSLIQPEPNYYHWRCTEVHGLTCA
DTDGAPVFSEVWKQIEPMIEGLPLVAHNAPFDKGCLKASFYTYQMDYPDYEFFDTLKAAR
QMLPHLPNHQLQTVSLACGYKLTDHHHALADAEACAWIAREIL
NT seq 492 nt   +upstreamnt  +downstreamnt
atgcaggactttgcagcgattgactttgaaacagcaaactttgagcggtgtagtgtatgc
tcggtgggtgtggtagtagtaaggggaggagagattgttgacagcttctattcgcttata
cagcccgaaccgaattactatcattggcgatgtacggaggtgcatggacttacctgtgca
gatactgatggtgcacccgtattcagcgaggtgtggaagcagatagaaccaatgatagaa
ggtctgccattggtagcacataacgcaccatttgacaaaggttgtttgaaggcttctttc
tatacctatcaaatggattatcccgactatgagttctttgatacgctgaaagcagcacgt
cagatgcttcctcatcttccaaaccatcagttgcaaacggtttctttggcttgtggttat
aagctaaccgaccatcatcatgcccttgctgatgcagaggcttgtgcgtggatagcacgt
gagatattgtag

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