Prevotella scopos: J4856_06340
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Entry
J4856_06340 CDS
T08373
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pscj
Prevotella scopos
Pathway
pscj00470
D-Amino acid metabolism
pscj00550
Peptidoglycan biosynthesis
pscj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4856_06340 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J4856_06340 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pscj01011
]
J4856_06340 (murD)
Enzymes [BR:
pscj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
J4856_06340 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pscj01011
]
Precursor biosynthesis
Amino acid ligase
J4856_06340 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
3HCDH_N
DBI_PRT
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QUB45771
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Position
2:complement(246696..248027)
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AA seq
443 aa
AA seq
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MKRIVILGAGESGAGAAVLAKKEGFDVFVSDMSAIKDKYKKMLDERGIEWEEGQHTEEKI
LNADEVIKSPGIPKEAPMVQKLIAQGTHIISEIEFAGRYTHSKMICITGSNGKTTTTSLI
YHIFKDAGYDAGLAGNIGNSLALQVAEDPHEYYIIELSSFQLDNMYDFRANIAILLNITP
DHLDRYDFKFENYADAKMRIIQNQTKDDSFIYWNDDPVIKKELEKFDVHAVCYPFSELKE
KGSIGYIEEGEYTIEQPEPFNMEQEDLSLTGRHNIYNSLAAGIASNISGIKKENIRKSLS
DFPGVEHRLEKVCKVAGVQYINDSKATNVDACWYALESMRTPTILIIGGKDKGNDYNCIK
DLVKKKCRGIVYLGADNKKLHDNFDNLGIPVRDTHSMKDCVAACAEMAKPGDTVLLSPCC
ASFDLFKNMEDRGEQFKSYVRAL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatagtaatacttggagctggcgagagtggtgctggtgcggccgtattggca
aaaaaagaaggctttgatgtttttgtatcagacatgtcagccattaaggacaagtataag
aagatgcttgatgaacgtggtattgaatgggaagaaggtcagcatacagaggagaagatt
cttaatgctgacgaagttatcaagagtcctggtattccaaaagaagcaccaatggttcag
aaactcattgcacagggaacgcatatcatcagtgaaattgaattcgctggtcgatatacc
cattccaagatgatatgtatcactggtagtaatggtaaaacaaccacaacgagtctcatc
tatcatatcttcaaagacgcaggttacgatgctggattagctggaaatataggaaacagt
cttgccctacaagtagcagaggatccacatgagtattatatcattgaactcagtagtttt
caattggataacatgtatgacttccgtgccaacattgccatccttctcaatatcactcct
gaccatttggatcgctatgactttaagtttgagaactacgcagatgcaaagatgcgtatc
attcaaaatcaaacgaaggacgatagtttcatctattggaatgatgaccctgtcatcaag
aaagaacttgagaagtttgacgtacatgctgtatgctatccattctccgaactgaaggag
aaaggcagtattggctacatagaagaaggagagtacacgatagaacaacctgaaccattc
aacatggagcaggaagacctctcactgacaggtcgtcataatatctacaactccttggca
gctggtattgcctcaaacatcagcggtattaagaaagaaaatatccgcaagagtctaagc
gacttccctggtgttgaacacagacttgagaaggtatgtaaagttgctggtgtacaatac
atcaacgactcaaaagccacgaatgtggacgcctgctggtatgcgttggaaagtatgcgt
actccaaccattctcatcatcggaggtaaagacaagggtaatgactacaattgcattaaa
gacctcgtgaaaaagaagtgtaggggtattgtttatctaggagctgacaacaagaaactc
catgataacttcgacaacctaggcatcccagttcgcgacactcactctatgaaggattgt
gttgcagcttgtgctgaaatggcaaagccaggggatacagttctattaagtccatgttgc
gctagctttgatctcttcaaaaatatggaagatcgtggtgagcaattcaagagctatgta
agggctttatag
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