Prevotella scopos: J4856_07150
Help
Entry
J4856_07150 CDS
T08373
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pscj
Prevotella scopos
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pscj02000
]
J4856_07150
Transporters [BR:
pscj02000
]
Other transporters
Pores ion channels [TC:
1
]
J4856_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF4489
Motif
Other DBs
NCBI-ProteinID:
QUB45913
LinkDB
All DBs
Position
2:429637..431607
Genome browser
AA seq
656 aa
AA seq
DB search
MKQKNIILSALVCLLPTTMWADELLDSIYKSLELEQVVVTGTRTPKLLANTPVLTKLITA
DDIMKTDATNLRDVLQQVIPGIEFSYAMNQQVHMNFSGFGGQSMLILVDGERLAGETMDD
VDFNRIGMDNVDHIEIVKGAASALYGSNAAGGVINIITKKKPNPCALNLNMRFGRHNEQR
YGMSWQYARGKWNNLFTVNRNSSDNFNVHNGPNPITRVVSTIYGDAVWNFKEQLTFRLNE
KLRLTGRAGYFYRQLVRTSEVPERYRDFSGGLRGMWTPDLVNSVDFSYAFDQYDKSDYQR
ITRLDIRDYSNVQNSIRLLYNHTFEGDNVLSVGADYMHDYLFNTNLEGRIRKQDSFDAFA
QYDWNISPKWEVVGALRYDYFSDGRISRLTPKVSARYQPIHNLNVRLSYGMGFRAPTLKE
KYYNFDMSGIWIVEGNPSLKPEVSQNFNASVDYTKGHYNFTVSAYCNRIENKIATGAPYY
KNPSDVVPHLPYINLNHYIVSGGEATAQARWTNGITARYSYAFTHERLPKDKNDNAVNNQ
YIPARKHSMTGHIDWDHQWSKNYGTNIGLDGRFLSAVDNEEFVDYYDISKGIKTIHYPAY
ALFKLSLVQRISKAVKVSVILDNIFNYKPEYYYLNCPLTDGTNLMVGMSVDVDKLF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaaaacattatactatcagctcttgtttgtctgcttcctacaacgatgtgg
gcggatgagttgcttgattctatatacaaatccttagagttagaacaggttgtagtgacg
ggaacacgtacaccgaagctacttgccaatacccctgtgttgacgaaactcatcacagct
gatgatatcatgaagacggatgccaccaatctgcgtgatgttttgcagcaggtgatacca
ggtattgagttctcatatgccatgaatcagcaggtccacatgaacttctcaggctttggt
ggacagagtatgttgattcttgtagacggtgaacgtcttgcaggtgagacgatggatgat
gtcgatttcaatcgtattggtatggataatgttgatcacattgagattgtgaaaggtgct
gcgtctgcgctttatggctctaatgctgctggtggagttatcaatatcatcaccaagaaa
aagccaaatccatgtgcactcaacttaaatatgcgctttggtcgccacaatgagcaacgt
tatggtatgtcatggcaatacgcaagaggtaagtggaacaatctgtttacagttaatagg
aatagttctgacaacttcaacgtacacaatggacccaatccaattacgcgagtagtttca
actatctatggtgatgctgtttggaactttaaggaacaacttacttttaggttgaatgaa
aagcttcgtttgacagggcgtgcaggctatttctatcgccagttggtacgtacatcagag
gttccagaacgctatcgtgacttttcaggtggtcttcgtggaatgtggacaccagacctt
gtcaatagtgttgacttctcctatgcttttgatcagtatgataagtcagactatcagcgt
atcactcgccttgatatacgcgattattcaaatgtacagaatagtattcgcttactttat
aatcacacttttgagggagataacgtcctttctgtaggtgcagattatatgcatgattat
ctctttaacacgaacttagagggacgaatccgtaagcaggactctttcgatgcctttgca
caatacgactggaatatcagtccaaagtgggaggttgtgggtgccttgcgttacgactac
ttctcagatggacgcatctcacggctgactccgaaggtaagcgcacgttatcagccaatt
cataacttgaatgttcgtctcagttatggtatgggtttccgtgcgcctacattgaaagag
aagtattacaactttgatatgtcaggaatatggattgttgaaggtaatccctctttgaaa
ccagaggtaagccagaatttcaatgcttcggttgactatacaaagggacactataatttt
acagtaagtgcttactgcaatcggattgaaaacaagatagccaccggagcaccttattac
aagaatccatcggatgttgtaccacatcttccttatatcaatctgaatcattacattgtt
agcggtggtgaagcaacagcacaggctcgttggacaaatggtatcacagcacgctatagc
tatgcttttacccacgaacgcctaccgaaggataagaatgataacgccgttaacaatcag
tatatacctgcccgtaagcattcaatgacaggtcacattgattgggatcatcagtggtcg
aagaactatggtacaaacatcggacttgatggacgttttctctcagctgtcgacaatgaa
gagtttgttgattactatgacatctctaagggtataaaaacaatacattaccccgcatac
gcactcttcaaactctctttggtgcagcgcatcagtaaggcggtgaaggtaagtgtcatt
ctcgataacatatttaattataaaccagaatattattatttgaattgtccattgactgat
gggacaaaccttatggtgggaatgtcagtggatgttgataaactattttaa
DBGET
integrated database retrieval system
