Prevotella scopos: J4856_07535
Help
Entry
J4856_07535 CDS
T08373
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pscj
Prevotella scopos
Pathway
pscj03030
DNA replication
pscj03430
Mismatch repair
pscj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4856_07535 (dnaE)
03430 Mismatch repair
J4856_07535 (dnaE)
03440 Homologous recombination
J4856_07535 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pscj03032
]
J4856_07535 (dnaE)
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_07535 (dnaE)
Enzymes [BR:
pscj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4856_07535 (dnaE)
DNA replication proteins [BR:
pscj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4856_07535 (dnaE)
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4856_07535 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
QUB45983
LinkDB
All DBs
Position
2:complement(522080..525799)
Genome browser
AA seq
1239 aa
AA seq
DB search
MEDYVHLHVHTNYSILDGQSKVTRLVDKAIADGMKGMAITDHGVMFGIKEFADYCAKVNK
GRKEKGEEPFKPIFGCEMYVARRTMHDKDKSMHDNSGYHLIVLAKNYTGYKNLIKLVSNA
WVDGYYYRPRTDREQLEKYHEGLIVCTACIAGEVPNKIIHDDIEGAREACEWYHRVFGDD
FYLELQRHEVKDPSLMANREAYPLQQKANKVLMEFAQEYGIKIVCTNDCHFEDKETAEAH
DHLLCLSTNEDLDDPKRMRYSKQEWFKTRAEMNEIFSDIPEAMTNTLEILDKVETYNINH
GPIMPFFPIPEDFGTEEEWKKKFSEEDIYKEFTTDENGNNPLSPEEGQAVIDRLGGYEKI
YRIKFEADYLAKLAYDGAKKLYGEPLSDEVDSRIRFELHVMKTMGFPGYFLIVQDFINAA
REELGVIVGPGRGSAAGSVVAYCLGITLIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGRVLQWVMDKYGHENCAHIITYSTMATKNSIKDVARVEKLPLDVSNALCKAIPERLPDG
MKMNLTNAIKCTPELQNAEVSEDIRERNTIKYAKMLEGTVRGTGIHACGFIICRNPIDEW
VPISTATDPDFPEKKVPVTQYDGHVIESTGLIKMDFLGLKTLSELKEACKVVKQTTGDVI
DLEKIPIDDELTYQLYQRGQTVGTFQFESAGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIKRKHDPSLVKYDIPCMEKYLKDTYGITVYQEQVMLLSRQLANFTRGESDALRKA
MGKKMKAIVDKMKPKFIKQGQENGHDPQVLEKIWSDWEKFASYAFNKSHATCYSWVAYQT
AYMKAHYPAEYMAALMTRRFSQITEITKLMEECKALKIATLGPDVNESQIGFGVNKHGEI
RFGLSAIKGMGASAADSIVRERTENGPYKDIYDFAERVDLSNVNRKAFESLAYSGGFDSF
GLQREQYFAVTAKGDLFLDTIVRYGQLFQAEKAQQQNSLFGGMDAIDVVHPIAPKAEKWP
VIEKLNKERELVGIYLSAHPLDEYSVVLNNMCNTRCSMIGRNANMTELAKADEVTFGGIV
TSVNERFSQKTGKPFGFVTIEDFEGTGELALFGDDWARWNNLLKMNYTVYITAKCQPRYR
NNPDMLELKVQKIEQLYDVKQNRLERFTISMDATALDDAFVSELATVIEEHIGNTQLYIQ
LRTPDNTVLMLRSKNGGVNVDRTLIDFISSNEKMEFHIN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaagattacgtacatttacacgtccacacaaattattctattctcgatggtcagtca
aaggtaacacgccttgttgacaaggctattgcagacggaatgaagggtatggcgataact
gaccatggtgtaatgtttggcataaaagagtttgctgattattgtgctaaggtcaataaa
ggtaggaaagagaagggcgaagaacctttcaaacctatctttggttgcgaaatgtatgta
gcccgtcgcacaatgcatgataaggacaagagcatgcatgataattcaggctaccacctt
atcgtattggcaaagaactatacaggatacaagaatcttattaaacttgtatctaatgcg
tgggtagatggttattactatcgtccccgtacagaccgtgagcagcttgagaagtatcat
gaaggactgattgtgtgtacagcttgtattgcaggtgaagttcctaacaagattattcat
gatgatatcgagggggcaagagaagcttgcgaatggtatcatcgtgtctttggagatgat
ttctaccttgagttgcaacgtcatgaagtaaaagacccaagtctgatggccaaccgtgag
gcttatcctctacagcagaaagccaacaaagtgctcatggagtttgcacaggagtatggt
ataaagatagtatgtaccaatgactgtcactttgaagataaggaaacagccgaggcacat
gaccacctgctctgtctttcaacgaatgaagatttggatgacccaaagcgtatgcgctac
tcaaaacaagagtggttcaaaacacgtgcagagatgaatgagattttctcagacatccca
gaagcaatgacaaatacgctggagattcttgataaggtagagacctacaatattaatcat
ggtcctatcatgcctttcttccctattccagaagactttggaacagaagaagaatggaaa
aagaagttcagcgaagaagatatatacaaggagtttacaacggacgagaacggaaataat
ccgctatcacctgaagaaggacaagccgttatcgaccgtttaggtggctatgagaagata
tatcgtattaagtttgaagctgattaccttgcaaagttagcctatgatggtgctaaaaag
ctgtatggcgaaccactatctgatgaggttgacagccgcatccgctttgagttgcatgtc
atgaaaacgatgggttttcctggttacttccttatagtacaagactttatcaatgcggca
agagaagaattaggcgtaatagtgggtcctggtcgtggctcggcggcaggctctgttgtg
gcttattgccttggtatcacgctgattgacccattgaagtacgacctactttttgagcgt
ttcctcaaccctgaccgtgtcaacctccccgatattgataccgactttgatgatgatgga
cgtggacgagtgttgcagtgggtcatggataagtatggacacgaaaactgtgcacatatt
attacctactctacgatggctacaaagaactccattaaggacgttgcccgcgtagagaaa
ctaccattagatgtctctaatgccctttgtaaggcgattcctgaacgattacctgatggc
atgaagatgaacttaacgaatgccatcaagtgcactccagagttgcagaacgcagaggtc
agtgaagacataagggagcgcaatactattaaatacgctaagatgctggagggaacagtg
cgcggaacgggtatccatgcctgtggattcattatctgtcgtaaccctattgatgaatgg
gtacctatctctacggcaacagacccagacttcccagagaagaaggtacctgtaactcag
tatgatggtcacgtgatcgaatctactggtcttatcaaaatggacttcctaggactgaaa
actctctccgagttaaaggaggcttgcaaggttgttaagcagacaactggtgacgtgatt
gaccttgagaagattcctattgatgacgaattgacctaccaactctatcaacgtggacag
accgttggtactttccagtttgagtcggcaggtatgcagaagtacctccgggagcttcat
ccaactgtgtttgaagaccttatcgccatgaatgcgctctatcgtccaggtccaatggac
tatatcccagactttatcaagcgtaagcatgacccatctttggtgaagtacgacatccca
tgtatggagaagtacctcaaagacacatacggtatcacagtctatcaggagcaagtaatg
ctcttgagtcgccagttggcgaactttacacgtggtgagagtgatgcccttcgtaaggcg
atgggtaagaagatgaaggctatcgttgacaagatgaagcctaagttcattaagcaagga
caagagaacggacacgacccacaagttcttgagaagatatggagcgactgggagaagttt
gccagctatgctttcaataagtcacatgccacttgctactcatgggtagcttatcagaca
gcctacatgaaggcgcattatccagccgaatatatggctgcgttgatgacacgtcgcttc
agtcagattaccgaaatcacaaagttgatggaggaatgtaaggcattgaagattgcaacc
cttggtcctgatgtcaacgagagtcagattggctttggtgtgaataagcatggtgagatt
cgcttcggactctctgctatcaagggaatgggggcaagtgcggctgatagtattgtacgt
gaacgcacggagaatggtccttataaggatatatatgactttgctgagcgtgtcgacctc
agtaatgtaaaccgcaaagcatttgaaagtttagcttatagtggtggtttcgacagcttc
ggtttacagcgagaacaatactttgcagtcactgcaaagggtgatttgttcttagatact
attgtccgttatgggcagcttttccaagctgaaaaggcacaacaacagaactccctcttc
ggaggcatggatgctattgatgtagtacatcctatcgcaccaaaggcagagaagtggcca
gtcattgagaaattaaacaaggagcgtgaacttgttggtatctatctgtcagcccaccca
ctcgatgaatacagtgttgtactgaacaacatgtgtaacactcgttgctctatgataggt
cgcaatgcgaatatgacagaattggcaaaagctgacgaagtgacatttggcggtattgtc
acatctgtaaacgaacgcttctcacaaaagacaggaaagccttttggctttgtcacgata
gaagactttgaaggaacgggcgaattagcattgtttggtgacgactgggcacgatggaac
aacctcctgaagatgaactacaccgtctatataacagctaagtgtcagcctcgttaccgc
aataatcctgacatgttagagctaaaggtgcagaagattgagcaactctatgacgtgaaa
caaaatcgtttggaacgctttaccatctctatggacgcaacagcattagacgatgccttc
gtttcagaattagcaaccgtcatcgaggaacacatcggcaacacacaactttacatacag
ttgcgaacacctgacaacacagttcttatgctaaggagtaagaatggtggcgttaacgtc
gaccgtacgctgatagactttatctcgtcgaatgagaagatggagttccatatcaactaa
DBGET
integrated database retrieval system
