Prevotella scopos: J4856_09455
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Entry
J4856_09455 CDS
T08373
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pscj
Prevotella scopos
Pathway
pscj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4856_09455 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_09455 (uvrA)
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4856_09455 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4856_09455 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_15
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND1
AAA_33
Viral_helicase1
AAA_22
AAA_14
ATPase_2
cobW
AAA_18
Ribonuc_2-5A
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QUB44986
LinkDB
All DBs
Position
2:966834..969662
Genome browser
AA seq
942 aa
AA seq
DB search
MKEKIEVFGARVHNLKNIDVTIPRNSLTVFTGLSGSGKSSLAFDTIFAEGQRRYIETFSA
YARNFLGNMERPDVDKIIGLSPVISIEQKTTNKNPRSTVGTTTEIYDFLRLLFARAGEAY
SYMSGEKMVKYTEEKVVDMIMSDYQGRKIHILAPLIRNRKGHYRELFEQMRRKGYLYIRI
DGEIEELTRGMKVDRYKNHNIEVVIDKMKLGGTENDTLRERLAKTVSTAMKQGEGLIMIL
DNERNEAKYFSKRLMDPITGIAYKDPAPNIFSFNSPEGACPQCKGLGVIDEIDLKKVIPD
DKLDIHSGAIVPLGKYKNQMIFWQIDALLKHYDCSLKTPVKDIPKEAMDEVLYGSLEKLK
IAKELVHTTSDYFVSFDGIIKYLRTVMENDDSSTGKKWADQFIAEVRCPECHGHRLNRET
LSYKIWDKNIADLAEMDITELKGWIDHVEEHMNEKQLTIAVEIIKEIRKRINFLLDVGLD
YLALNRQSATLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQCDNERLINSLKELRD
MGNTVIVVEHDEDMMRVADWVIDIGPKAGRKGGEVVFQGKPTDMLKTHTLTAQYLNGARA
IEIPKERRKGNGKTVQLIGCKGNNLKDVNVTFPLGELIVVTGVSGSGKSTLINETLQPIL
SQHFYRSLKRPMPYGKIEGIDNIDKVVNVDQSPIGRTPRSNPATYTGVFSDIRQLFVNLP
EAKIRGYKPGRFSFNVKGGRCETCGGNGYKTIEMNFLPDVMVPCEVCHGKRYNRETLEVR
FKGKSIADVLDMTVNMAVEFFENVPQILPKIKALQDVGLGYIKLGQSSTTLSGGESQRVK
LATELAKRDTGKTLYILDEPTTGLHFEDIRILMDVLQKLVDRGNTVIIIEHNLDVIKLAD
YIIDMGPEGGRGGGRVLSCGTPEVVAKNKESYTSEFLAKVLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaatagaagtcttcggagccagagtacataatctgaagaatatagatgta
accatcccacgcaactcacttacagtttttaccggactatctggttcgggaaagagttcg
cttgccttcgacactattttcgctgaaggacagcgtcgctacattgagaccttctcggca
tacgcacgcaacttccttggaaatatggagcgtcctgacgtagataagattataggactc
tctcctgttatctcaattgaacaaaagacaacgaataagaaccctcgctctaccgttgga
acaactaccgagatatacgattttctccgacttctctttgctcgtgcaggtgaagcttac
tcttacatgagtggtgagaagatggtaaaatatacggaggagaaggtggttgatatgatt
atgtctgattatcaaggtagaaagatacacatccttgccccactcatccgcaatcgtaaa
ggtcactatcgtgaactctttgagcaaatgcgtcgcaaaggttatctgtatatacgcata
gatggagagatagaggaacttacgcgtggcatgaaagtagatcgttacaaaaaccataac
atcgaagttgttatcgacaagatgaagcttggtggtacggagaatgataccctacgtgag
cgtttagcaaagacggtttcaacagcaatgaaacagggagaaggtttgattatgattctt
gataacgagcgtaatgaagctaaatacttttctaaacgactgatggaccctatcacaggt
attgcatataaagatcctgcaccaaacatcttctcattcaactctccagaaggagcctgc
cctcagtgcaaaggcttaggagtcattgatgagatagacttaaagaaggttataccagat
gacaaactagacattcatagcggtgcaattgttcctttagggaaatacaaaaaccagatg
atattctggcagatagatgcattactaaaacattatgattgtagtctgaaaacaccagtt
aaagacattccaaaagaggcaatggatgaagtcttgtatggttcacttgaaaagttgaag
attgccaaagagcttgttcataccacttctgattactttgtatcctttgatggcatcata
aagtacctccgcacagttatggagaatgatgactcatcaacaggaaagaaatgggcagac
cagttcatagctgaagtacgatgtccagaatgtcatggtcaccgactaaatcgtgagaca
ttgtcgtataaaatatgggacaaaaacattgccgaccttgcagaaatggacatcacagag
ttgaaaggttggattgatcatgttgaggaacacatgaatgagaagcaacttacgattgcc
gtagaaatcataaaagagattcgtaagcgtataaactttctattggatgtgggtcttgac
tatcttgcattaaatcgtcagagtgccaccctctctggtggagagagtcagcgtatccgt
cttgcaacgcagattggttcgcagttggttaacgtgctttatattcttgacgagccttcc
attggtctgcatcaatgcgataacgaacgtctcattaattcacttaaggaactacgtgat
atggggaataccgtcatcgttgtggaacacgacgaagacatgatgcgtgtcgctgactgg
gtaatagacatcgggccaaaagctggtcgcaaaggtggggaggttgtcttccaaggaaag
cctactgatatgcttaagacgcatacactcacagcacaatacctgaatggtgcacgtgct
atcgaaatacctaaggaacgtaggaaaggcaatggaaagaccgtccaactcattggttgt
aaaggtaataacctcaaggatgtaaacgtaaccttcccacttggtgaactgattgtagtc
actggtgtgtcaggttcaggaaagagtacactcatcaatgagactttacagcctatcctt
tcacaacacttctaccgctcactaaagcgtccaatgccttacggaaagattgaaggcata
gacaacatagacaaagtggtgaatgttgaccaaagtccgattggacgtacaccacgtagc
aatcctgccacttatacaggtgttttctcagatattcgtcaactcttcgtcaatcttcct
gaagcaaagattcgtggttacaaaccgggacgattctcatttaacgtgaagggaggacgc
tgtgaaacctgtggcggaaatggttacaaaactattgaaatgaacttcttacctgacgtg
atggtaccttgcgaggtatgtcatggcaaacgttataaccgtgaaacgcttgaagtacgc
ttcaaaggcaagtcaattgctgacgtattagatatgacagtcaatatggcggttgagttt
tttgagaatgttccgcagatattaccaaagataaaggctttacaggatgttggattaggc
tatatcaaacttggacaaagttccactaccctctctggtggtgagagtcagcgtgtaaag
ttagcgacagaactcgctaaacgtgatactggtaagacgctatacattcttgatgaacca
acaaccggtttacactttgaagatatccgtatcttaatggatgtgttgcagaaacttgtg
gaccgtggcaatactgttatcatcatcgaacataacctcgatgtcatcaaacttgccgat
tatattattgacatggggccagaaggtggtcgtggtggtggtcgtgtgctgagttgtgga
acaccagaagtagtggcaaaaaataaggagagctacacttctgaattccttgcgaaagtg
ctaaaataa
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