Prevotella scopos: J4856_10485
Help
Entry
J4856_10485 CDS
T08373
Name
(GenBank) DEAD/DEAH box helicase
Organism
pscj
Prevotella scopos
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QUB45175
LinkDB
All DBs
Position
2:1210590..1214621
Genome browser
AA seq
1343 aa
AA seq
DB search
MLSFSSLNSSERTILMLMAYFYKYGQTKEKLSNLLEKIMLPSLSDLAFKRLMTDGLLVEV
NLHNYGGGKVLYINKDMLIPSLFELFKEENSLLLQNIRRLYKKTYDNDTPSPLVRLIIYY
IATNAEEAISTSYAQVLDSFNDCCLNLIDEREYESFFLSMTTELLSFVLNATLRMAMSQD
RIMDWEYLKGLVFNRKKTGNSVAKRSELESVFAYYYYLGTGKICINLKTSVSDIFTLQIA
AIDALYKGDYALAYRLYTKVMTANNKVALIKGIFVNPIANYYFSLAAIFTNTETSLKKLE
TMMKRNGDRKYTPTYFLVQPLKAYFYDKSDANIQKESYLDMCKKPNMQMVSWLTWTMYPT
FGILPTKATKPIDPPNWAFLQLETGIMESSSSEANLVKNFGGTSLLSRLEVKSLWQLRLE
TLIAENQTAENQTTETIRDIMLVYLLRYGIVVPILKRRLKNGSWSVGKELSIRELINLDI
PGLDSIDQRIKEGIFSWDYSIYIEKYLYLFVDCDHIYTGSTYDLQPVKIHKDNPHLIIDK
RSDGSFSVSTNVIELQNGEKTSFFYKKNSETDYSVFTPSDFEYKTYKEILAQETYPAEAE
SLLIQLIKAVGGKTEIHSNMVAELDDLERIDVEPWITLRVISSADNCFKLAAMVRITDSL
CYVPGKGNVTTIAEQEGKKVQLVRNLKKERNNLKMISEGLAEAEFFEEGETWKPQSISET
LTLPINTFLPFIQWCKEHKEICTMEWAEGNKIKFYPGISSSSAQISFKSKNGWFEIEGDV
EFSEGHVISLQKLLEVMHQSVQQKYIRISDNEFITLSNQLSRILKRLDTITTESRSHLQM
APAAVALLGDLWNDEALNIQNNDGINALRQRIEESSKKVPTIPKTLQAQLRDYQEEGFEW
MSRLTAWGAGVCLADDMGLGKTVQTITLLLEQSENGPSLIVAPSSVVPNWRNELQRFAPS
LNLTILNQSEDRSKDIKDAKAGDVIITTYGILNTQQEDLAGREWNVVCLDEAHTIKNANT
KMSKSAMQLKAQRKVILTGTPIQNHLAELWNLFQFINPGLLGSAEQFKKKFILPIEGEND
KARQSQLRRLISPFLLRRTKAEVVDELPAKNDIKLPVELSSEEMSMYEVKRREAEAMVLK
NNKDKVSTLAEITRLRQMACSCSLVDKKWKLPSSKVLAFIDLAESLNDSGNRALVFSQFT
SFFEEVRKAMDKAKLPYLYLDGSTPMAMREKLVKEFQTGKCPFFLISLKAGGLGLNLTGA
NYVIHLDPWWNPAIEQQATDRAYRIGQKQDVTVYHLISQHTIEEKILRLHKTKRNLSDSL
LEGSDMSHAMTQEELLELLQDNR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgctttcattctcttcccttaattctagcgagcgcacaatccttatgctgatggcttat
ttttacaaatatggtcaaactaaggagaaactatcaaacttgttggagaagataatgttg
ccatctctttccgatttggcttttaaaaggttaatgaccgatggtttactggtagaagta
aatcttcacaattacggaggtggaaaagtattgtacataaataaggatatgctgattcct
tctctctttgaacttttcaaagaagaaaacagcctattattacagaatattcgcagactt
tataagaagacttatgataatgacaccccatctcctttggtgcgtttgataatatattat
atagcgacaaatgctgaggaagcaatatcaacttcctatgcacaagtcttagattcattc
aatgactgttgccttaacttgattgatgaaagagaatatgagagcttctttctatcaatg
accacagaattattgtcttttgttctgaatgcaactcttcgtatggcaatgtctcaggat
agaataatggactgggaatatttaaaaggacttgttttcaaccgtaaaaaaacaggcaat
agtgtagctaaaagaagtgaattagaatcagtctttgcttactattactatttaggaacg
ggtaaaatctgtattaatcttaaaacatctgtaagcgacatctttacacttcagatagct
gcgattgatgccttgtataaaggagattacgctttggcctataggctatacaccaaggtg
atgaccgctaataataaggtagctcttattaagggaatctttgtaaatccaattgctaat
tattatttctcgcttgcagcaatctttactaacactgagacctctctgaagaagttagaa
acgatgatgaagcgtaatggggatagaaaatacacgcctacatacttccttgtacaaccg
ttgaaggcttatttttatgataagtctgatgcaaacatacaaaaagagtcttaccttgac
atgtgtaagaagcctaatatgcagatggtttcatggcttacttggacgatgtatccgact
tttggaatacttccgacaaaggcaactaagcctattgacccacctaattgggctttctta
cagctggagactggcattatggagagtagttcttctgaagcaaatttggtgaaaaacttc
ggtggtacatcactattgagccgattagaagtaaaatctctttggcagcttcgacttgaa
acgctaattgcggagaatcaaacagcagagaatcaaacaacagagactattcgagacata
atgctcgtatatctgttgcgttatggaattgttgttcccattcttaaacgtaggttgaaa
aatggtagttggtctgtaggtaaagagctttctattcgtgaacttataaatctagatatt
ccgggcttagatagtattgaccagcgtattaaagaaggaatcttttcgtgggattatagt
atctatattgagaagtatctgtacctttttgtggattgtgaccatatttacactggttcc
acctacgacttgcagcctgtgaagattcataaggacaatccacaccttatcatagataaa
cgttcggatggttctttcagtgtctctacaaatgtaatagaattgcagaatggtgaaaaa
acatctttcttttataagaagaattcagaaacagactattctgtctttactccgtctgac
tttgaatataagacctataaagaaatattagcacaagaaacttatcctgctgaagcggaa
tccttactcattcagttgattaaggctgttggcggaaagacagaaatacactctaatatg
gtggctgaacttgacgacttggagcgtattgacgtagaaccctggattacactccgtgtt
atttcttctgctgacaactgttttaaacttgctgccatggtgcgtatcactgatagcctt
tgctatgtgccagggaaaggaaatgtcactactattgccgaacaagagggtaaaaaagta
caattggttcgcaacctaaagaaagaacgtaacaaccttaaaatgattagtgaggggttg
gctgaagcagaattctttgaagagggcgaaacatggaaaccacaaagtatttcagaaacg
ctaacacttcctatcaacacgttcttaccttttattcaatggtgtaaggaacacaaagag
atctgtacaatggaatgggctgaaggaaataagataaagttttatccaggcatcagcagt
agctctgcacaaatctcattcaagtcaaagaatggatggtttgagatagaaggtgatgta
gaattcagcgaaggacacgttatttcactccagaagttgctcgaagtaatgcatcaaagt
gttcagcagaagtatatacgcattagtgataatgagttcataacgctaagcaatcagctt
tcacgcattcttaaacgtcttgacaccataacgacagagagccgttcacatctgcagatg
gcgccagctgccgtagctttgttaggtgatttgtggaacgatgaggcgttgaacattcag
aataatgatggtattaacgctttacgccaacgcatcgaagagagtagtaagaaagttcct
accattcccaagaccttacaagcacaattacgcgattatcaggaggagggatttgaatgg
atgtcaagattgactgcatggggagcaggagtctgtttggctgacgatatgggattggga
aagaccgttcaaacgatcacgttgctgcttgaacagagcgagaatggaccatcactgatt
gttgcaccttcctctgtcgtacctaactggcgcaatgagcttcagcgattcgcaccatcc
ttaaacctcaccattctcaatcagagtgaggatcgttcaaaagatatcaaagacgcaaaa
gcaggagatgtcattatcacgacgtatggtatattgaatacacaacaagaagaccttgca
ggaagagagtggaatgtggtatgcctcgacgaagcccataccataaagaatgccaacaca
aaaatgtcaaagtcggccatgcagttaaaggcccaacgcaaagttatccttacgggtaca
cctatccaaaaccatctggcagagttgtggaatctcttccagtttattaatcctggtctt
ttgggaagtgcagaacagttcaagaagaagtttatcctgcctattgaaggtgaaaacgac
aaagcacgtcaaagtcagttacgccgtctgatatctcccttccttttgcgcagaacgaaa
gcagaagttgttgatgagttacctgccaagaacgatataaaactccctgtcgaactatca
tcagaagagatgtcgatgtatgaggttaaaagacgtgaggcggaggctatggtccttaaa
aataataaggataaagtgagtacgttggctgagattactcgtttgcgtcagatggcatgc
agctgttcgttggtggacaagaaatggaagctaccaagcagcaaggtcttagctttcatt
gatctggctgaaagtcttaacgacagtggcaatcgtgcgcttgttttcagtcagtttacc
agtttctttgaagaggtgagaaaggcgatggataaggcaaaacttccatatctttacctt
gacggaagtacaccaatggctatgcgtgagaagttagtaaaggagttccaaactggaaaa
tgtcctttcttccttatcagtctaaaggctggaggattgggattaaaccttacgggagct
aactatgttattcatcttgacccttggtggaatcctgctatcgaacagcaggctactgac
cgtgcctatcgtatcggtcaaaaacaggacgtaacagtctatcatcttattagccagcac
accatcgaggagaagattctacgcttacataaaacaaaacgtaacctttccgactcactt
cttgagggttctgatatgtctcatgcaatgacacaggaagaactactcgaattgctgcaa
gataacagataa
DBGET
integrated database retrieval system
