Prevotella scopos: J4856_11280
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Entry
J4856_11280 CDS
T08373
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pscj
Prevotella scopos
Pathway
pscj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4856_11280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pscj03019
]
J4856_11280 (recQ)
03400 DNA repair and recombination proteins [BR:
pscj03400
]
J4856_11280 (recQ)
Enzymes [BR:
pscj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4856_11280 (recQ)
Messenger RNA biogenesis [BR:
pscj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4856_11280 (recQ)
DNA repair and recombination proteins [BR:
pscj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4856_11280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QUB45312
LinkDB
All DBs
Position
2:complement(1415699..1417882)
Genome browser
AA seq
727 aa
AA seq
DB search
MTQEVNLTEKLKHYFGFDKFKGDQEAIIRNLLAGHDTFVLMPTGGGKSLCYQLPSLIMEG
TAIVVSPLIALMKNQVDVINGISEENGVAHYLNSSLKKAEIDKVRSDIVSGRTKLLYVAP
ESLNKEENMEFLKSVKISFYAIDEAHCISEWGHDFRPEYRKIRCAIETIGTAPVIALTAT
ATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRPKKGDDDTNKQIIKFIKQHTGKSGI
IYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDIIVATIAFGMGI
DKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICVVFYSKKDLNKLEKFMEGKPVAEQ
DIGRQLLQETEAYAESSVCRRKMLLHYFGEGYPKCNCSMCDNCLHPKTKIEAQKQLLVVL
QAVKTLKENFRQEYVIDFVRGRATDDQKDHKHDELDDFGEGEDENPKIWNPVIRQALLAG
YLKKDVENYGLLKLTAAGKRFLKSPESFMIVMDTEFREEDEDEDPMMGTAVLDPELFSML
KNLRKKIAHKLEIPPYVIFQDVSLEQMAMMYPINEQELQNIQGVGAGKAKRYGKEFLELI
KQHCEENNIERPEELRVRTVAKKSIQKVKIIQSIDRKLPLDDIALAEGLDFDDLLTKIEE
IVYSGTKLNIDYFLEDVYDEDQVDDIYDYFMESETDSLDAAMEELDSDYSEEEIRLVRIK
FLSEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaagtcaatcttaccgaaaaactaaaacactactttggctttgataagttc
aaaggcgaccaggaagcaattattcgtaatcttcttgccggacatgatactttcgtattg
atgccaactggtggtggcaagagtctttgctatcagcttccctcattaattatggaagga
acggcaattgtcgtttctccgctcattgcattgatgaagaaccaagtggatgtcatcaat
ggaatcagcgaggaaaatggtgtggcacattatctcaactcatcgttgaagaaagcagaa
attgataaggttcgttcagatatcgtttcaggtcgtacaaaactgctctatgttgctcca
gagtctttgaataaggaggagaatatggagttcctgaagtcagtcaagattagtttctac
gccatcgatgaggcacattgtatctcggagtggggacatgatttccgaccagagtatcgt
aagattcgttgtgctatcgaaacgattggcactgctcctgtcattgctttgacagcaacg
gctactgataaggtgcgtacggatattgtacgtagcttaggtattgaggattgtgccgag
ttcaaaagctcttttaatcgtccaaacctttattatgaggtacgtccgaagaagggtgat
gacgatacgaataagcagattatcaagtttatcaaacagcatacaggcaagagtggtatc
atctattgtctttcacgtaagaaggtggaagagttagctgctatcttgcaagctaatgat
attaaggctgctccttatcacgcaggactcgattctgagacacgctctaagacacaggac
gactttctcatggaagagttggatattattgtggcaacgatagcctttggtatgggtatt
gacaaaccagacgtacgatttgtcatccactatgatattccgaagagccttgaaggctat
tatcaggaaacaggacgagcaggacgtgatggagaagaaggcatctgtgttgtgttctat
tctaaaaaagaccttaataaactggagaagtttatggagggaaagcctgttgctgagcaa
gatatcggtcgtcaattgttacaagagaccgaagcctatgcagaatcatctgtctgccgc
cgtaagatgctgttacattactttggtgaaggctatccaaaatgtaactgctcaatgtgt
gacaattgtttgcatccaaagacaaagatagaagctcagaagcaacttctcgtcgttctt
caagctgtgaagacattgaaagagaacttccggcaagagtatgttatcgattttgtgcgc
ggtagggctactgatgatcagaaagatcataagcatgatgagttggacgactttggagag
ggcgaggatgagaatcctaagatttggaatcctgtgatacgtcaagcactcttggcaggt
tatctgaaaaaggatgttgaaaactatggtttactaaaacttactgctgctggtaaacga
ttcttgaaatctccagaatcgtttatgatagttatggataccgagttcagagaggaagat
gaggatgaagacccaatgatgggtacggcagttcttgatccagaactcttctctatgttg
aagaacctccgcaagaagattgcacataagttggagattcctccttacgtcatcttccag
gatgtctcattggaacagatggctatgatgtatcctatcaacgaacaagaattacagaat
atccaaggtgtcggtgctggtaaggcaaaacgttacggaaaggaattccttgagttgata
aagcagcattgtgaggagaataatattgaacgtccagaagagttacgagttaggacggtg
gctaagaagtctatacagaaggttaagattatccaaagtattgatcgtaagttaccactt
gatgatattgcattagctgaaggccttgactttgatgatttgctgacaaagatagaagaa
atcgtatatagtggaacaaaactcaatatcgactacttcctagaagatgtgtatgatgag
gatcaggtagatgatatttatgattactttatggaaagcgagactgatagcctcgatgct
gctatggaagagcttgatagtgactatagcgaagaagaaattcgtcttgtacgcattaag
ttcttgtcagagatggctaactaa
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