Prevotella scopos: J4856_12085
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Entry
J4856_12085 CDS
T08373
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
pscj
Prevotella scopos
Pathway
pscj02024
Quorum sensing
pscj03060
Protein export
pscj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
J4856_12085 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J4856_12085 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4856_12085 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pscj02044
]
J4856_12085 (secDF)
Secretion system [BR:
pscj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
J4856_12085 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QUB45453
LinkDB
All DBs
Position
2:complement(1617067..1620087)
Genome browser
AA seq
1006 aa
AA seq
DB search
MQNKGLVICVAILLTLASIFYLSFSVATSFYDGQAATIKDPIARQDYKDSVKYLGIYSYQ
KCLETQIGLGLDLKGGMNVVLEISVPDVVDFLADHKQDAAYQKALETAKQEEMKSQKDFI
TLFVDAYHKDAPGHKLAEIFATQQLKGKVSTQSTDEEVEKALRQEVSAAIDNSYNVVTNR
IDQYGVVQPNIQKLEGQEGRLMVEMPGIREPERMRKLLQGSANLEFWETYNNQEVNPYLV
QLDQRLANGETKTDTTATDSTKKVNAKDASANKLILNASNETKAENAQTDAMKKMHPLLS
MLQTMPGDALSLVGYASVRDTAAINKLIHSQLAKQILPSDLKLLWGAKPADGLNKKNVFE
LYALKVTTSDGRAPLEGDVVTDAKDNFDQHGRPEVSMTMNSEGAREWAALTKANVGKAIA
IVLDGVVYSAPRVNGEITGGQSSISGNFTIEDTKDLANTLMSGRMPAPAKIVQEEVVGPT
LGAQSIEQGLISFAIAFVLLMLYMIVMYNFIPGMMANLALIANLFFTLGVLASFQSALTM
PGIAGIVLTLGTAVDANVLIYERIKEELKLGKGMKQALKEGYGNAFSAIFDSNLTSLITG
VILLVTGTGPIRGFATTWIIGIVISFFTAVFLTRLVFENRVGKDKWMNLTFTTAFSKNFM
QNKNYHFLSMYKTTFTVWGVAVLVCIVSFAVRGLSRSIDFTGGRNYVVTLNKPTHVEDVR
KVMNGAFVNTVGENAGKPATTTVIALGTDGKTIRVSTNYNIDSNNPAEDDKAETILYNAL
KKGGFVSQASVQNFKNPDIREGGSIIQSAKVGPSIAKNITYNAIMSVLLAIFFIFLYILL
RFRNIGFSVGSIVGLVLDTTIVIGCFSLCYGWIGFSLEIDQTFIGAILTVIGYDINDTVV
VYDRIRENLAKHKHNLAKADIQKIFNDSINQTLSRTINTSVSTLIVLVSIFVLGGDSIRS
FSFAMIIGIIIGTLSSIFIASPVAYLVLGKKIEKRSKELAEAPVEA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggattagtaatttgcgtagccattctcttgacgctcgcaagtatcttc
tacctgtcattttcagtagcgacaagcttctatgatggtcaggcagcaacgattaaagac
cctattgcacgacaggattataaggattctgtaaagtatttgggtatctattcttaccag
aaatgccttgaaacacagatcggtcttggtcttgacttgaagggcggtatgaacgttgtt
cttgagatttcagtacctgatgtagttgatttcttggcagatcacaagcaggatgctgct
tatcaaaaggcattagagactgctaagcaggaagagatgaaaagtcagaaggactttatc
actctctttgtagatgcttatcacaaggatgctccaggtcataaacttgcagagatcttc
gctacacagcaactcaagggaaaagttagtacacagagtactgatgaagaggttgagaaa
gcacttcgtcaggaggtttctgcagccatcgacaattcgtataatgtcgtaacaaatcgt
atcgaccagtatggcgttgtacagccaaatatccagaagttggaaggccaggagggtcgc
ctcatggttgaaatgcctggtattcgtgagccagagcgtatgcgtaaactccttcagggt
tcggctaaccttgagttctgggagacttataacaatcaggaggtaaatccttaccttgta
cagttggatcagcgtttggctaatggtgaaacaaagactgacactacagcaactgattct
acgaagaaggtaaatgctaaggatgcatctgctaataagttaatactcaatgcaagtaat
gagacaaaggctgagaatgctcagacggatgcaatgaagaagatgcacccattgctctct
atgttacagactatgcctggtgatgcacttagccttgttggttatgctagcgtacgtgat
acagctgctatcaataagcttattcacagccagcttgcaaagcagattttgccaagcgac
ttgaagctcctttggggtgctaagcctgcagatggacttaataagaagaatgtatttgaa
ctttatgctttgaaggtgactacttctgatggtcgtgctccattggagggtgacgttgtt
actgatgctaaggataattttgaccagcacggtcgtcctgaggttagcatgacaatgaac
tctgaaggtgcgcgtgagtgggctgctttgacaaaggctaacgtgggtaaggctatcgca
atcgtattggatggcgtcgtttattcagctccacgcgtaaatggtgagattactggtggc
cagtcatctatctctggtaacttcacaattgaagatacaaaggacttggctaacacattg
atgtctggtcgtatgcctgctcctgcaaagattgtacaggaggaagtcgtaggtcctaca
cttggtgcacagtctattgagcagggtcttatctcttttgctatcgctttcgtcctcttg
atgctttacatgattgtcatgtacaacttcattccaggtatgatggctaaccttgctttg
atagccaacctcttcttcacgttgggtgtcttagcgtccttccagtcggcattgactatg
ccaggtattgccggtatcgtgttgaccttaggtacagctgtagatgctaacgtgcttatc
tacgagcgtattaaggaggagttgaagctcggtaagggtatgaagcaggcattgaaggaa
ggttatggaaatgccttctcagctatcttcgactctaacttgacatcactcatcaccggt
gttatccttcttgtgacaggtacaggtcctatccgtggtttcgctactacttggatcatt
ggtatcgttatctcattcttcacagcagtattcctcacacgtctcgtattcgagaaccgt
gttggtaaggataagtggatgaatttgaccttcacaacagcgttctcaaagaacttcatg
cagaataagaactatcacttcctcagtatgtataagacaacctttactgtttggggtgtt
gctgtcttggtatgtattgtaagtttcgcagttcgtggtttgagtcgcagtattgacttc
actggtggtcgcaactatgttgtcacattaaacaagcctacccatgtagaggacgttcgt
aaggtgatgaatggtgccttcgtaaatactgttggtgagaatgctggtaagcctgctaca
acaactgttattgcattaggtacggatggtaagacaatccgtgtatcaacaaactacaat
attgattctaacaatcctgcagaggatgacaaggctgagacaatcctttacaatgcattg
aagaagggtggctttgttagtcaggcaagtgtacagaacttcaagaatccagatattcgt
gagggcggctctattattcagagtgcaaaggttggtccttcaatcgctaagaacattact
tataatgctatcatgagcgtattgttggctatcttcttcatcttcttgtatatcctcttg
cgtttccgcaacattggtttctctgttggttcaatcgttggacttgttcttgacacgaca
atcgttatcggttgcttctcattatgctatggttggataggcttctcacttgagattgac
cagaccttcatcggtgctatcttgactgtaatcggttatgatatcaacgatactgtggtt
gtttacgatcgtatccgtgagaacttggctaagcacaagcacaatcttgcaaaggctgat
atccagaagatcttcaatgattctatcaaccagaccctctcacgtactatcaacacctca
gtatcaacattgattgtactcgtatctatctttgttcttggtggtgatagcatccgtagc
ttctcatttgcaatgattatcggtattattatcggtactttgagttcaatcttcatcgca
tctcctgttgcttacctcgtattgggtaagaagattgagaagcgttcaaaggaacttgca
gaggcacctgttgaggcttaa
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