Mollisia scopiformis: LY89DRAFT_161104
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Entry
LY89DRAFT_161104 CDS
T04865
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
psco
Mollisia scopiformis
Pathway
psco03013
Nucleocytoplasmic transport
psco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LY89DRAFT_161104
03015 mRNA surveillance pathway
LY89DRAFT_161104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_161104
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LY89DRAFT_161104
mRNA cycle factors
P-body specific factors
LY89DRAFT_161104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
28815230
NCBI-ProteinID:
XP_018077285
JGI:
161104
UniProt:
A0A194XRL5
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MGTSGMENGSRAQTNGVLAVTASQTSGTSSRSAGVKSSNPKLKVIIRRLAPSLTETEFTT
ILGEQWRPGKGQIDWFLYKPGKDSKDPSKPSRPSRAYMHLTNEGYLHALYETVQEAVFED
AHTTFTSPCLIGPPSVEFAPYGRTPGGRRRIDARAGTIDQDPEFMAFLEGLANPTSTKEV
SADALTDNTSGKQDKVTTTPLVQFLKDKKANKNKDAAVKLAKKQETQLKNKSSKDSPSSS
VEDGKKKSKDVKVDKSLEKAAKEAVRILNREAAAKSGVSELTQSSEATTSQASTPPKLDV
TKVPGRQRSAVVAAHIRMLQRDLGLTPAQAHRQVRRDTADAQKAERAAAAAEKAASETKE
SSASQPQAMASSSRPPSTQSRKVRGKAIATTEPQLNKSSTTSSAAPPAPVVLLRKPDTQQ
SSQVTLPSTHPPKPTPSVPASVARKSQTAVAVPSSGATQAFVKHANPSQGVTEALLKEAM
EKYGGVSMVEIDKRKGFAYVDFVDTDGLKNAMAANPISVAQGTVQVMQRKGTALPPEKKP
PHQAPQALSRGGSRGGRGGTIRRGGRGGLGGRGGGSAANTSETKAPSAAPTGPAVK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtcagggatggagaacggcagccgtgctcaaacaaatggagttctcgccgtt
acagcttcccagacatctggtacttcttctcgatcagctggagtcaaatcgtcaaacccg
aaactaaaagttatcattcgaagactggctcctagccttacggaaacagaattcacaacg
attctcggggaacaatggagacctggcaagggtcagattgattggtttctctataagcct
ggcaaagattccaaagatccatctaaaccttctagaccctcgagggcgtatatgcacctg
accaacgaaggatatctccacgccctatatgaaactgttcaagaagcagtcttcgaagat
gcccacacgacgttcaccagtccctgcctgattggccctcccagtgtcgagtttgctcct
tatggccgaacacctggaggtcgaaggcgtattgatgcccgagcaggtaccattgaccaa
gatccagagttcatggccttcctcgaaggactagctaatcctacctcaacgaaggaagtc
agcgcagacgcattgacggacaacacctcaggcaagcaagataaagtcacgacaactcca
cttgtacagtttctgaaggacaagaaggcgaacaagaacaaggatgcagcagtgaagctc
gccaagaaacaagaaactcaactcaagaacaagtcttccaaggattctccgtcgtcatca
gtagaagacggtaaaaagaaaagcaaagatgtcaaggtggacaaatctctggagaaggca
gcgaaggaggcagtgagaatcctcaacagagaagctgctgcgaagtcgggtgtctctgag
ttgactcaatcctcggaagccaccacttcacaagcatcaacaccgccaaaattagatgtc
accaaggtccctggccggcaaagatcggcagtcgttgcagcccatattcgtatgttacag
cgtgatcttggattgactcccgctcaggcccatcgacaagtgaggcgtgatactgcagat
gctcaaaaggccgagagagctgctgctgcagccgagaaagcagcaagtgagacgaaggaa
tcctcagcgtcgcaaccgcaagcaatggcaagttcttcgagaccgccatctactcagtcc
agaaaagttcggggcaaggcaattgcaactaccgaaccacaattgaacaaatcctccact
acttcgtccgcagctcctcctgccccggtcgttcttttgaggaagcctgatactcaacaa
tcctctcaagtaacgctaccatctacgcatccacccaaaccaaccccatctgtaccagcg
tcggtcgcccgcaagtcacagactgctgttgctgtcccgtcatcaggcgccacacaagca
tttgtcaagcatgccaatccttcccagggtgtaactgaagcactcctcaaggaggctatg
gagaagtatggaggtgtttccatggtagagattgataagcggaagggttttgcctacgtt
gatttcgtcgacacagatggtcttaagaacgcaatggcagcaaatcccatctcggtagct
caaggaacggtccaagtcatgcagcgaaaggggaccgccctgccgccagagaagaagcca
cctcaccaagctccacaagccctttctagaggtggttctcgaggtggcaggggcgggact
atcagacgtggtggtagagggggtctaggtggtcgaggtggaggaagtgcagccaatact
tcggaaaccaaagccccatctgctgcacccaccggaccggctgttaagtga
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