KEGG   Mollisia scopiformis: LY89DRAFT_183389
Entry
LY89DRAFT_183389  CDS       T04865                                 
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
psco  Mollisia scopiformis
Pathway
psco03013  Nucleocytoplasmic transport
psco03015  mRNA surveillance pathway
psco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LY89DRAFT_183389
  09122 Translation
   03013 Nucleocytoplasmic transport
    LY89DRAFT_183389
   03015 mRNA surveillance pathway
    LY89DRAFT_183389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psco03019]
    LY89DRAFT_183389
   03041 Spliceosome [BR:psco03041]
    LY89DRAFT_183389
Enzymes [BR:psco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LY89DRAFT_183389
Messenger RNA biogenesis [BR:psco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LY89DRAFT_183389
Spliceosome [BR:psco03041]
 Complex C
  Other components
   EJC/TREX
    LY89DRAFT_183389
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    LY89DRAFT_183389
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 DUF4844
Other DBs
NCBI-GeneID: 28815363
NCBI-ProteinID: XP_018077826
JGI: 183389
UniProt: A0A194XTK1
LinkDB
Position
Unknown
AA seq 327 aa
MCHTRELAYQIKNEYARFSKYMPEVKTAVFYGGTPIQKDAEIIKNKETHPHIIVATPGRL
NALVRDKHLRLGSCKVFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSQEVR
PICKKFMQNPLEIYVDDETKLTLHGLQQYYIKLDEKEKNRKLNELLDELQFNQAIIFVRS
TLRATELDKLLTDCNFPSVAVHSGVSQDERYISLYIMFGSRLTCISIRRYKAFKDFQERI
CVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEADQEVL
KSIEKRFEVALPEFPEGGIDAATYMSG
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtgccacacccgcgagttggcttaccaaatcaagaacgagtatgctcgattctcaaag
tacatgccagaggtcaagactgccgtgttctatggtggaactcccatccaaaaggatgct
gagatcatcaagaacaaggagactcatccccacatcatcgtagccacacctggtcgattg
aacgccttggtcagagacaagcacctccgacttggcagctgcaaggtcttcgtccttgat
gagtgtgacaagatgttggaccagatcgacatgcgtcgtgatgttcaggagatcttcaga
gctacccctacccagaagcaagtgatgatgttcagcgccaccctgtcccaagaggttcgc
cctatttgcaagaagttcatgcagaatcctcttgagatttacgtcgacgatgagaccaag
ctcactctccacggtcttcaacaatactacatcaagcttgatgagaaggagaagaaccgc
aagttgaatgagcttcttgatgagttgcaattcaaccaggccatcatctttgtccgaagc
accctccgagctactgaacttgacaaacttctgacggactgcaacttcccctctgttgct
gttcattccggagtcagccaggatgagcggtatatttcactctacattatgttcggatct
cgactaacatgcatcagtattcgccgctacaaggcattcaaggatttccaagagcgtatc
tgtgttgccactgatgtcttcggacgtggtatcgacattgagcgtatcaacttggccatc
aactacgaccttccagctgatgccgactcgtacctccaccgtgttggtcgtgctggtcgt
ttcggaaccaagggtctctccatctctttcgtcagcagcgaggccgaccaagaggttttg
aagtcgattgagaagcgcttcgaggttgctcttccagagttccctgagggaggtatcgat
gccgccacctacatgtccggttag

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