Mollisia scopiformis: LY89DRAFT_351226
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Entry
LY89DRAFT_351226 CDS
T04865
Name
(RefSeq) DEAD-domain-containing protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_351226
03041 Spliceosome [BR:
psco03041
]
LY89DRAFT_351226
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_351226
Enzymes [BR:
psco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY89DRAFT_351226
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
LY89DRAFT_351226
mRNA cycle factors
Common to processing body (P body) and stress granule
LY89DRAFT_351226
Spliceosome [BR:
psco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LY89DRAFT_351226
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
LY89DRAFT_351226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
28816645
NCBI-ProteinID:
XP_018062031
JGI:
351226
UniProt:
A0A132B5I5
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MADQLNMNGLNLNGGPGGAEQRSYIPPHMRGKVGGPAPAGPPPANGGPPMNGGINGSAWG
PAARNGFAGDAPRPGGNWASAPDFTPRGNGPAGAPPAGRGAGGWDNYKEPAAFNRNAYGN
PAAGGGSGGGSAPARGGGDGQWRDGKHIAGPPNPRLERELFGVADDPTKQQTGINFEKYD
DIPVEASGHDVPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACA
QTGSGKTGGFLFPILSQAFINGPSAPPAGAAGNFGRQRKAYPTSLILAPTRELVSQIYDE
SRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLV
LDEADRMLDMGFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSV
GRVGSTSENITQKVEYVEDMDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNF
PATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYV
HRIGRTGRAGNTGISTAFFNRGNRGVVRDLIDLLKEANQEVPAFLENIAREGSGFGGGGR
GGGRSGGRGRGGGANRDFRKFGGGAGGGPGYGGGGFGGAPAPSYGGGFGGPPPPAAYGGA
PSYGGGFGGGSYGNPSGGGSGQSWW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaactcaacatgaatggcctgaacctcaacggcggacccggcggcgctgaa
cagcgttcctacatccctcctcacatgcgcggaaaggttggcggaccagctcctgctggg
cctccacctgctaacggcggacctcctatgaatggcggaatcaacggcagtgcttggggc
cctgctgccagaaacggcttcgcaggtgacgctcctcgtcctggtggaaactgggccagc
gctcctgacttcaccccacgtggcaacggacctgctggtgctcctcctgcgggtcgaggc
gctggaggatgggacaactacaaggaacctgctgcattcaatcgcaatgcttatggtaac
cctgcagccggtggtggcagtggcggcggctctgcaccagctcgtggtggtggagatgga
caatggcgcgatggcaagcatattgcaggaccacccaaccctcgtcttgagcgtgagctc
tttggcgttgccgatgacccaaccaagcaacaaactggtatcaacttcgagaagtacgac
gatatcccagtcgaagcctctggacacgacgtccccgagccagtcctgaagttcaccaac
cctcccctcgatgatcacctcatcaagaacatcgagcttgctcactacaaggtccctact
ccagtccagaagtactccatcccgatcgttatgggtggtcgtgacttgatggcttgtgcc
caaaccggttccggaaagactggtggattcttgttccctatcctttcccaggccttcatt
aacggtccttcggccccaccagccggtgctgcaggaaacttcggtcgccaacgcaaggca
tacccaacctccttgatcctcgctcctactcgtgagcttgtatcccagatttacgatgag
tcccgcaagttcgcctaccgatcatgggtccgaccatgtgttgtctacggtggtgctgac
attggatctcaactccgtcaaatcgagcgaggttgtgatcttctcgtggccaccccaggt
cgtcttgtcgatcttattgagcgtggccgtatctctctctgcaacatcaagtacttggtt
ctcgatgaggctgatcgtatgttggacatgggtttcgagcctcaaattcgtcgtattgtt
gagggcgaggatatgccaggtgttcagaaccgtcaaaccctcatgttctccgccaccttc
cccagagatattcagatgcttgctagagatttcttgaaggattacgtcttcttgtctgtt
ggtcgtgttggttccacctctgagaacatcacccaaaaggttgaatacgttgaggatatg
gacaagcgatctgttctgttggatattctccacactcacggtgctggtcttaccctgatc
ttcgttgagactaagcgtatggccgactcgctgtccgacttcctcatcaaccaaaacttc
cctgctacgtccattcacggtgatcgcactcaacgtgagcgtgagcgtgctctcgagatg
ttccgcaacggccgatgcccaatcctcgtcgctactgctgtcgctgctcgtggtcttgat
attcccaatgtcacccatgtcgttaactatgacttacccacagatatcgatgactacgtc
caccgaatcggtcgtacaggtcgtgctggtaacactggtatctccaccgccttcttcaac
cgtggcaaccgtggtgtcgttcgtgatctcatcgatcttctgaaggaggccaaccaagaa
gtcccagccttcctcgagaacattgctcgtgagggctctggatttgggggtggtggacgc
ggtggtggacgctcaggtggccgaggccgtggaggtggagccaaccgtgatttccgcaag
tttggtggtggcgctggaggtggaccaggatacggcggtggtggatttggcggtgcccca
gctccttcttatggcggtggcttcggtggacctccccctcctgctgcctatggcggtgct
ccctcttacggtggtggctttggcggtggaagctatggcaacccatccggaggcggcagc
ggccaatcctggtggtaa
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integrated database retrieval system
